Gene Ccel_1823 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCcel_1823 
Symbol 
ID7310551 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium cellulolyticum H10 
KingdomBacteria 
Replicon accessionNC_011898 
Strand
Start bp2179709 
End bp2180521 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content39% 
IMG OID643608754 
ProductIntegrase catalytic region 
Protein accessionYP_002506152 
Protein GI220929243 
COG category[L] Replication, recombination and repair 
COG ID[COG2801] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.484824 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGCCAAA TACTAAAAAT ATCAAGAAGC GGTTATTATG CTTGGATTAA AAGGCCTGAA 
AGCTTGCGCA AGAAAAGGAA TGTGGAACTT CTTGAAAAAA TCAGAAACAT TCACAAAGTA
TCCCGTGAAA CCTATGGAAG CCCCCGGATA ACCAAGGCTT TAAAGAATGA AGGCATAAAC
TGTGGTAAAA ATCGTATAGC TAAACTGATG AAGGAAAATA ATATTACTGC TAAAACTAGG
AAGAAGTTTA AGGCTACAAC TAATTCAAAG CACAATTACC CGGTTGCAGA TAATATCCTA
AATCAGGACT TTACAGCTTC TAGGCCTAAT CAAATCTGGG TTGCAGATAT TACTTATATT
CCTACAGACG AGGGTTGGCT CTATTTGGCT GCCATTGTTG ATCTCTACAA CAGAAAAGTT
GTTGGATGGG CAATGGATAT CACTATGACA AAACAGCTTT GTATAGATGC TTTAAAGCAA
GCCATCGGCA GGCAGAGACC ATCAAATGGA GTGATTCATC ATTCCGACCG AGGGGTCCAA
TATGCCAGCA AGGAATATCA GAAAGTACTG AAAAGCAATG GTTTTACAGC AAGTATGAGT
CGCAAGGGTA ACTGTTACGA TAATGCCTGT ATGGAATCAT TCTTTGGAAC TCTCAAAACG
GAGCTTATTT ACTTAACAAG GTTCAAAACA AGGACTGAGG CCCGTCTGGC TATCTTTGAG
TATATTGAAG TCTTTTATAA TCGGATACGA TTACATTCAA AGCTTGGCTA TAAGTCGCCT
GTGGAATTTG AAAAGCAAAA CAAAGCTGCT TAA
 
Protein sequence
MCQILKISRS GYYAWIKRPE SLRKKRNVEL LEKIRNIHKV SRETYGSPRI TKALKNEGIN 
CGKNRIAKLM KENNITAKTR KKFKATTNSK HNYPVADNIL NQDFTASRPN QIWVADITYI
PTDEGWLYLA AIVDLYNRKV VGWAMDITMT KQLCIDALKQ AIGRQRPSNG VIHHSDRGVQ
YASKEYQKVL KSNGFTASMS RKGNCYDNAC MESFFGTLKT ELIYLTRFKT RTEARLAIFE
YIEVFYNRIR LHSKLGYKSP VEFEKQNKAA