Gene Ccel_1710 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCcel_1710 
Symbol 
ID7310451 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium cellulolyticum H10 
KingdomBacteria 
Replicon accessionNC_011898 
Strand
Start bp2055849 
End bp2057054 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content32% 
IMG OID643608638 
Productprotein of unknown function DUF58 
Protein accessionYP_002506041 
Protein GI220929132 
COG category[R] General function prediction only 
COG ID[COG1721] Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAAAAA ATAGAATTAC CTTTATATTT TTATTTATAT TATCAATAGT TTTTTTATAC 
AACTTCGGCG GTTTTGTATC CTATTTCTTT TTTAATACTT TTTTGGCCCT ATTGATTTTA
TCCATTGCAT ATACCATATT TATTTTTGTA AGAATCAAAT TTATACAGGA AATAGACAAA
AGGGTGATTA TCAAGGGTGA GAACGTAAAA CTTGTTGTAA AAATCTCAAA CGAGGATATT
TTATTATATC CTTACGTTTT TGCATCCTTT TATTCTTCAC ATTCTGCACT AAAGGGCGAG
AATTCTTCGC AAAGCTTGTC AATAAATCCT AAGTCTCATA AGGAATTTAT TTTTGATATG
GAATGTAAAT TCAGAGGTGA ATATGAGGTG GGTCTAAGAG AAATTTATAT TGAAGATTTT
CTGGGTTTGA TAAAATTAAA ATATAAAATA CCGGAACCTA AGAAAATTAT TGTTTACCCT
AAAATTGAGC ATCTTTCAAA TTTCAGTATT CTGTCCTCCG GCAGTTCCGA TTCTCAAAGT
GTTGAAAACG GTATACAGGA TAATATGAAT AACATTAAAG ATATACGTGA ATACATTGAT
GGCGACAGTT TCAGAAAGAT ACACTGGAAG CTTACAGCCA GAAATGACAA ACTTATGATT
AAAAACTACG AGGGTTCTAT AGATGCAAAT GTTAATATTC TTCTTGACCT AAGAAAAAAC
GTCTATAATG ATGAAGAAAA TATAATTATA GAAGATAAGC TTATTGAGGC TGTAGTTGCA
GTATTGTATT TTTATTTGTC CAAGAGTATT CCGGTTAATT ATGTATACTT TAGCGAGAAA
CTTGAGGTAT TTAAGGCATC CACTATGATG GACTTCGAAC AAATCTACAA AACATTATCA
TGTGTAAACT TCGATCAGCA GGTAGCTATG CCCGATATTC TGAGACTGCA TTCGGAATCC
TGTTCAAACT CATCGGATAT GATTGTTTTT ACCAGTATAC TGGATATTGA TTTGTATAAT
GAAATGTACA AATCACAGAT GGCAAACCAT ACTGTCACTC TTATTTATGT ATCACCGGAC
AGTTTCGGAA ATGTTAAATC CAGCATCATC GAAGATATAA TGGATAACCT CCCCGAAATA
GGTATTAAAG CATATTCCAT ACATCCAGAC GATGATATAA AAATCTTACT TGGAGGTTCG
GACTGA
 
Protein sequence
MRKNRITFIF LFILSIVFLY NFGGFVSYFF FNTFLALLIL SIAYTIFIFV RIKFIQEIDK 
RVIIKGENVK LVVKISNEDI LLYPYVFASF YSSHSALKGE NSSQSLSINP KSHKEFIFDM
ECKFRGEYEV GLREIYIEDF LGLIKLKYKI PEPKKIIVYP KIEHLSNFSI LSSGSSDSQS
VENGIQDNMN NIKDIREYID GDSFRKIHWK LTARNDKLMI KNYEGSIDAN VNILLDLRKN
VYNDEENIII EDKLIEAVVA VLYFYLSKSI PVNYVYFSEK LEVFKASTMM DFEQIYKTLS
CVNFDQQVAM PDILRLHSES CSNSSDMIVF TSILDIDLYN EMYKSQMANH TVTLIYVSPD
SFGNVKSSII EDIMDNLPEI GIKAYSIHPD DDIKILLGGS D