| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccel_1642 |
|---|
| Symbol | |
|---|
| ID | 7312259 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium cellulolyticum H10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011898 |
|---|
| Strand | - |
|---|
| Start bp | 1978780 |
|---|
| End bp | 1979781 |
|---|
| Gene Length | 1002 bp |
|---|
| Protein Length | 333 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 643608570 |
|---|
| Product | periplasmic binding protein/LacI transcriptional regulator |
|---|
| Protein accession | YP_002505973 |
|---|
| Protein GI | 220929064 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.000000807495 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAGAA TGAAAAGACT CGTAGCAATG CTAGTAGCTG CAATAATGCT AATCACTTTC
GCAGCTTGTT CTTCAGACAC CAGCAAAAAT TCGTCGGAAG AATCCAAGTC TTCTGACACA
ACTAAAGTAA CTGAAACAAG CAAGCCTGCT GACAAAAAAA TTGTTGTTGG AATGACACTG
TACAGTCTAA AAAATGAATT CACAGTCCGC CTTTCAAATG CTGCTAAGAA GAAAGCAGCA
GAATTGGGAG TGGAACTCAA GATTTATGAC GGTAACTATG ATCCAAACAC ACAAATAAAC
CAGGTAGAAA CAATGATTTC TGACGGTGTG GATGCTATTA TTCTAAATCC TCAGGATGCA
AAGGCCTGTG CGGTAGCGGT TGATAAGGCT GCAGCAGCAA ATATACCTGT AATCGGAGTT
AACACACGTG TTGACAGCGA AAAACTTACA AGTTACGTTG GCTCAAAGGA CGTATATGCA
GGTGAATTGG AGATGCAGGC AATTGCTGAT AAGATCGGTG GAAAGGGCAA CATAGTTATA
CTTGATGGTC CTCTCGGACA ATCAGCTCAG CTAGAACGCA GCGAGGGAAT CCAAAATGTA
CTTAAGAAAT ATCCTGATAT AAAGGTTTTG GCAGAAAAAA CAGCAAACTG GTCACGTTCA
GAAGCAATGA CAGTTATGGA AAACTGGTTG CAGGCTTTTG ACAAGATAGA TGCAGTTGTT
GCTGAAAATG ATGAAATGGC ACTGGGTGCA AGAAAAGCAA TTGAAGCTAA GAAACTGGAT
ATCCCTACAA TCGGTGTTGA TGGTATAACA GATGCTTTGG ATGCTGTAGA AAAAGGAACA
TTAATTGCAA CAATATTCCA AGATGGTGCA GGACAAGGAA GTAAAGCATT AGAAATTGCT
GTTGCTAAAG CTAAAGGCGA AAATGTTGAC AAGGAATACT GGATTGATTT TGAACCCGTA
ACAAAGGACA ATGTAGCAGA ATTCAAGCAA AGAGCACAAT AA
|
|---|
| Protein sequence | MKRMKRLVAM LVAAIMLITF AACSSDTSKN SSEESKSSDT TKVTETSKPA DKKIVVGMTL
YSLKNEFTVR LSNAAKKKAA ELGVELKIYD GNYDPNTQIN QVETMISDGV DAIILNPQDA
KACAVAVDKA AAANIPVIGV NTRVDSEKLT SYVGSKDVYA GELEMQAIAD KIGGKGNIVI
LDGPLGQSAQ LERSEGIQNV LKKYPDIKVL AEKTANWSRS EAMTVMENWL QAFDKIDAVV
AENDEMALGA RKAIEAKKLD IPTIGVDGIT DALDAVEKGT LIATIFQDGA GQGSKALEIA
VAKAKGENVD KEYWIDFEPV TKDNVAEFKQ RAQ
|
|---|
| |