Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ccel_1626 |
Symbol | |
ID | 7312258 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium cellulolyticum H10 |
Kingdom | Bacteria |
Replicon accession | NC_011898 |
Strand | - |
Start bp | 1962132 |
End bp | 1963691 |
Gene Length | 1560 bp |
Protein Length | 519 aa |
Translation table | 11 |
GC content | 29% |
IMG OID | 643608555 |
Product | AMP-dependent synthetase and ligase |
Protein accession | YP_002505958 |
Protein GI | 220929049 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1022] Long-chain acyl-CoA synthetases (AMP-forming) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGTTAAAAA ATGACATTAA GAGTTTCTAT CAATTATTCA ATTACATAAA AGATAATAAT GATAATTACA TTAATTATTT GAGTTGGAGC GGTAAAAAGT ATAAGTATTT TAGAAAAACT TTTTCTGAAA TTCATGATGA TATACAAGCT TGTTATAATA ATTTAAAACA AGCCGGTATA ACAGAAAATT CAGTTATTTA TATTGATATT GATAATTCTT ATGAGTTTTT AATTTGTGAT TTTGCTATTA TTCTTACAGG TGCATTATCT ATAGTTTCTA ATAATACCGA GCCATTAGAT AAAGTTAAAG ATAGAGTTAG ACAGTTTAAA GCAGAGTACA TAATCAGTAA AAGAGAGCTT ATAGATTCAC TGGTTGATGT TAACGTTATT GACATTAGTT CCTTATTTCA AATAGGGAAT AATTCAATAG TTACTCAGAC TCTTTATAAT AATAAAGATT TTTCAGTGGT ATTTTCATCT GGAACGTCAG GATTTCCCAA AGCGTTAGGT ATTACTGAAC AGGGATCTAT TGGAAGTTCA AAACATTTTT TTAATTATAT GGGTTTTTGT TCATCGGATA AGTTTATGAT TTATCTGCCG CTGGCAAATT ATCAGCAACG CTTTTTCTTT TGGGGATGCT TGATTACTTC TGTTAACATA GCTTTAGGCG ATGATAAATC CCTTTTTCAT GCACTGAAAG AATTTAACCC AACAATTTTA TTAGCTCCGC CAAATTTCTA TTATAATCTG TTCTGTTCAG ACAATAATAA TGGATTCTTT AAAAAAATAT TTAAGAATAT AAATAATAAA TTTATTTGCA AGCATATTAC TCATAAGCCA ATATATGAAG CATTGGGAAA GAAAATGCAT TATCTGCTTA CTGGTATGGC ACCAATTGAT CTTAAAGTTT TAGAGCATTT TAGTGATATC AAGTTAGAAA TTTATCAGAT TTATGGTCAG ACCGAGATTG GGATGATAGC CTGTAACAAT AAAAAACTAA ATAAAATTGG AACTGTAGGA AGACCAATTA TCAAGCTTTA CCTATCTGAT GACAATGAAA TAGTTACCGA AAGCGTTTTT CCAATTGTCA GCTGTTATTA TAGGGAAGAC AATACAAAAG ATTTCTTGGG TATGGTTAGA CCAACAGGGG ATGTTGGGAG TATAGATAAT GATGGATTTT TAAGTATTAA CGGAAGAAAA AATGAGACAA TTATACTTAA TAACGGGATC AAGATAAACC CTATTATGAT TGAAAATAAG ATAAAGTCAA GCTTACAAAT AGCTGACATG GTAATCTTTA AAACAAGACA AGAGAGTAAT AACTTTGCTT TAAATATCGT TTTATTAATA GATGGCTTTT CAAATTTAAA CTCCGAGGCT ATAAAACAGA ATATAAACAG TGTTCAAGAA ATTAAATCAA ATACAAATAT CGTTAATATT TACAAATATG ATTTAAAAAT CGAGGAAAAG AAGGTTTTCT ATACAGAGAA CGGAAAGTTT TCACGAGTGA GAGCTATTGA TTTCTTTAAA GAGAATTTTG AAAAGTTGGT AAAAATCTAA
|
Protein sequence | MLKNDIKSFY QLFNYIKDNN DNYINYLSWS GKKYKYFRKT FSEIHDDIQA CYNNLKQAGI TENSVIYIDI DNSYEFLICD FAIILTGALS IVSNNTEPLD KVKDRVRQFK AEYIISKREL IDSLVDVNVI DISSLFQIGN NSIVTQTLYN NKDFSVVFSS GTSGFPKALG ITEQGSIGSS KHFFNYMGFC SSDKFMIYLP LANYQQRFFF WGCLITSVNI ALGDDKSLFH ALKEFNPTIL LAPPNFYYNL FCSDNNNGFF KKIFKNINNK FICKHITHKP IYEALGKKMH YLLTGMAPID LKVLEHFSDI KLEIYQIYGQ TEIGMIACNN KKLNKIGTVG RPIIKLYLSD DNEIVTESVF PIVSCYYRED NTKDFLGMVR PTGDVGSIDN DGFLSINGRK NETIILNNGI KINPIMIENK IKSSLQIADM VIFKTRQESN NFALNIVLLI DGFSNLNSEA IKQNINSVQE IKSNTNIVNI YKYDLKIEEK KVFYTENGKF SRVRAIDFFK ENFEKLVKI
|
| |