Gene Ccel_1626 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCcel_1626 
Symbol 
ID7312258 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium cellulolyticum H10 
KingdomBacteria 
Replicon accessionNC_011898 
Strand
Start bp1962132 
End bp1963691 
Gene Length1560 bp 
Protein Length519 aa 
Translation table11 
GC content29% 
IMG OID643608555 
ProductAMP-dependent synthetase and ligase 
Protein accessionYP_002505958 
Protein GI220929049 
COG category[I] Lipid transport and metabolism 
COG ID[COG1022] Long-chain acyl-CoA synthetases (AMP-forming) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTTAAAAA ATGACATTAA GAGTTTCTAT CAATTATTCA ATTACATAAA AGATAATAAT 
GATAATTACA TTAATTATTT GAGTTGGAGC GGTAAAAAGT ATAAGTATTT TAGAAAAACT
TTTTCTGAAA TTCATGATGA TATACAAGCT TGTTATAATA ATTTAAAACA AGCCGGTATA
ACAGAAAATT CAGTTATTTA TATTGATATT GATAATTCTT ATGAGTTTTT AATTTGTGAT
TTTGCTATTA TTCTTACAGG TGCATTATCT ATAGTTTCTA ATAATACCGA GCCATTAGAT
AAAGTTAAAG ATAGAGTTAG ACAGTTTAAA GCAGAGTACA TAATCAGTAA AAGAGAGCTT
ATAGATTCAC TGGTTGATGT TAACGTTATT GACATTAGTT CCTTATTTCA AATAGGGAAT
AATTCAATAG TTACTCAGAC TCTTTATAAT AATAAAGATT TTTCAGTGGT ATTTTCATCT
GGAACGTCAG GATTTCCCAA AGCGTTAGGT ATTACTGAAC AGGGATCTAT TGGAAGTTCA
AAACATTTTT TTAATTATAT GGGTTTTTGT TCATCGGATA AGTTTATGAT TTATCTGCCG
CTGGCAAATT ATCAGCAACG CTTTTTCTTT TGGGGATGCT TGATTACTTC TGTTAACATA
GCTTTAGGCG ATGATAAATC CCTTTTTCAT GCACTGAAAG AATTTAACCC AACAATTTTA
TTAGCTCCGC CAAATTTCTA TTATAATCTG TTCTGTTCAG ACAATAATAA TGGATTCTTT
AAAAAAATAT TTAAGAATAT AAATAATAAA TTTATTTGCA AGCATATTAC TCATAAGCCA
ATATATGAAG CATTGGGAAA GAAAATGCAT TATCTGCTTA CTGGTATGGC ACCAATTGAT
CTTAAAGTTT TAGAGCATTT TAGTGATATC AAGTTAGAAA TTTATCAGAT TTATGGTCAG
ACCGAGATTG GGATGATAGC CTGTAACAAT AAAAAACTAA ATAAAATTGG AACTGTAGGA
AGACCAATTA TCAAGCTTTA CCTATCTGAT GACAATGAAA TAGTTACCGA AAGCGTTTTT
CCAATTGTCA GCTGTTATTA TAGGGAAGAC AATACAAAAG ATTTCTTGGG TATGGTTAGA
CCAACAGGGG ATGTTGGGAG TATAGATAAT GATGGATTTT TAAGTATTAA CGGAAGAAAA
AATGAGACAA TTATACTTAA TAACGGGATC AAGATAAACC CTATTATGAT TGAAAATAAG
ATAAAGTCAA GCTTACAAAT AGCTGACATG GTAATCTTTA AAACAAGACA AGAGAGTAAT
AACTTTGCTT TAAATATCGT TTTATTAATA GATGGCTTTT CAAATTTAAA CTCCGAGGCT
ATAAAACAGA ATATAAACAG TGTTCAAGAA ATTAAATCAA ATACAAATAT CGTTAATATT
TACAAATATG ATTTAAAAAT CGAGGAAAAG AAGGTTTTCT ATACAGAGAA CGGAAAGTTT
TCACGAGTGA GAGCTATTGA TTTCTTTAAA GAGAATTTTG AAAAGTTGGT AAAAATCTAA
 
Protein sequence
MLKNDIKSFY QLFNYIKDNN DNYINYLSWS GKKYKYFRKT FSEIHDDIQA CYNNLKQAGI 
TENSVIYIDI DNSYEFLICD FAIILTGALS IVSNNTEPLD KVKDRVRQFK AEYIISKREL
IDSLVDVNVI DISSLFQIGN NSIVTQTLYN NKDFSVVFSS GTSGFPKALG ITEQGSIGSS
KHFFNYMGFC SSDKFMIYLP LANYQQRFFF WGCLITSVNI ALGDDKSLFH ALKEFNPTIL
LAPPNFYYNL FCSDNNNGFF KKIFKNINNK FICKHITHKP IYEALGKKMH YLLTGMAPID
LKVLEHFSDI KLEIYQIYGQ TEIGMIACNN KKLNKIGTVG RPIIKLYLSD DNEIVTESVF
PIVSCYYRED NTKDFLGMVR PTGDVGSIDN DGFLSINGRK NETIILNNGI KINPIMIENK
IKSSLQIADM VIFKTRQESN NFALNIVLLI DGFSNLNSEA IKQNINSVQE IKSNTNIVNI
YKYDLKIEEK KVFYTENGKF SRVRAIDFFK ENFEKLVKI