Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ccel_1263 |
Symbol | |
ID | 7310056 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium cellulolyticum H10 |
Kingdom | Bacteria |
Replicon accession | NC_011898 |
Strand | + |
Start bp | 1567636 |
End bp | 1568325 |
Gene Length | 690 bp |
Protein Length | 229 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 643608184 |
Product | GntR domain protein |
Protein accession | YP_002505599 |
Protein GI | 220928690 |
COG category | [K] Transcription |
COG ID | [COG2186] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCAATTA AGAAGGTTAC ACGTCAAAGT GTAAGCGAAC AGGTCTTTGA GCAATTAAAG GAGCAGATTT TGAGTAATGA GTGGAAGAAA GGAGAAAAGA TCCCTTCTGA AAATGAATTG GCCGCATTAC TGGGAGTAAG TCGTGTTACG GTACGGAATG CACTACAGAA ACTGATATCC TTAGGATTGA TAGAGACCAG GTTTGGGGAA GGCTCATTTA TCACCGATGC CCTACCTGGA ATCAGTATGA ATTCTTTAAT ACCAATCGCT TATTTAAAAG AGAACTCACT GCAGGAGATT TTAGAATACC GCAGGGTACT GGAAGGCAAT GTAGCTGAAC TTGCCACAAA GAAGGCTTCT GCCGAAGACG TGGCAAAGCT TGAGGAGGCA TATTTGGCCA TGGAAAAGGT TAAGGATGAT CTAGAACAGT TCTCCAAGGC AGATTTAAAT TTTCATTTGC TCCTTGCAAA TATAACTAAA AATTCTCTTA TAATTCAAAC CTTTTATATA TTTAGTGATG TTTTAAACCG GGCATTTTCT CAAATTGTTA CAAAAAGGGG TAACAGTGCG GGAATCTATT ATCACAAATT GTTGTTTGAA GCCGTTAAAG GTAGTAATTC TCTTGATGCA AAAAGAATAA TGGATGAACA TATGGAGGAC TTGTACAATA CTTTTCAAAC TAATATATAA
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Protein sequence | MPIKKVTRQS VSEQVFEQLK EQILSNEWKK GEKIPSENEL AALLGVSRVT VRNALQKLIS LGLIETRFGE GSFITDALPG ISMNSLIPIA YLKENSLQEI LEYRRVLEGN VAELATKKAS AEDVAKLEEA YLAMEKVKDD LEQFSKADLN FHLLLANITK NSLIIQTFYI FSDVLNRAFS QIVTKRGNSA GIYYHKLLFE AVKGSNSLDA KRIMDEHMED LYNTFQTNI
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