Gene Ccel_1237 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCcel_1237 
Symbol 
ID7310034 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium cellulolyticum H10 
KingdomBacteria 
Replicon accessionNC_011898 
Strand
Start bp1520816 
End bp1522630 
Gene Length1815 bp 
Protein Length604 aa 
Translation table11 
GC content42% 
IMG OID643608158 
ProductCarbohydrate binding family 6 
Protein accessionYP_002505573 
Protein GI220928664 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3345] Alpha-galactosidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0649618 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAG TTCGTACAGT CAGTACAATT ATCTTTTTAG GACTTATGAT TACCGTAATT 
ATGGTTTTGA ATACTGGTGC ATGGGATAAC GGTCTTGCAA AAACACCACC GATGGGATGG
AACAGTTGGA ACATATTCCA TGGAGACATT AATGAAACTA AAATCAAACA GATTGCTGAT
ACCATGGTAA GCTCGGGTAT GAAGGAAGCT GGCTATGTAT ACCTGAATCT GGATGATAAC
TGGATGGCAA ATCCTGCAAG AGATTCCAAT GGGAACTTGC GGGCCGATCC TACACGATTC
CCAAGTGGGA TTAGGGCTTT AGCTGATTAT GTACATGCAA AAGGTCTCAA ACTAGGGATA
TACGGATGTC GTGGAACAAT GACCTGTATG AATATTCCTC AAAGCGGAAG CAAGGGTTAT
GAGGACAAGG ATGCAAAGAC ATTTGCTTCA TGGGGAATTG ATTACCTTAA ATATGATAAC
TGCAATATAC CTAACGGAAG TGACATGAAA ACCGATTACC AGAAAATGCA GACCGCTCTT
GCAAATTGCG GAAGACCAAT AGTATTCAGT ATATGTGCAT GGGGATATCA GAGCTGGATG
CCTGCAACAG GTAATTTATG GCGTACTACC GGGGATATCG CTGATAAGTG GGATAACGGA
AACGAATGGT TCAAAGGTAT TATAAATGCA ATTGATGGTA ATGCACAATA CACAAGTTCA
GCCGCACCCG GTGCATGGAA TGATCCTGAT ATGCTTGAAA TCGGAAACGG TGGATGTACA
ACAGAGGAAT ACCGTACACA GATGAGTATG TGGAGTATGA TGGCTTCTCC CCTTATTGCA
GGAAATGATA TAAGGACCAT GTCACAGACA ACAAAGGATA TTCTATTGAA TAAGGAAGTA
ATAGCAATAG ACCAGGATCC TGCAGGAGTT CAGGGAAAAA GAGTTAAAAG TGCAAATGGT
CTTGAGATTT GGGTAAAACC ACTGGGTACG AATGGTACAA CTAAGGCAGT TGCTTTATTG
AACAGGAATT CGGCAACATC CAATATTACA GTTAATTGGT CAGATATAGG TGTAAGTGGA
AGTGTTACGG TCAGGGATTT GTGGGCTAAA TCTGACAAAG GCAGTTTTAC GGGCTCATAC
ACAGCGTCTG TTCCTTCACA TGGAACTGTT TTGATTAAGA TTTCCACTGA GCCGCCGGCA
CCTGTTGATG CAACAAAGCA AATAGAAGCA GAGAGTTATA GCAATCAGTC AGGAATCCAG
ACAGAAACCT GTTCGGAAGG CGGAGAGGAT GTAGGCTTTA TCGAAAACGG GGACTATACT
GTTTACAGCA ATGTGGATTT CGGTGATGGA GTCGGAGGCT TCCAGGCAAG AGTAGCAAGT
GCGACCAGCG GAGGCAATAT TGAGATTAGA CTTGACAGCC CTGCCGGGAC TTTAATTGGA
ACCTGTCCGG TTGCCGGAAC AGGGGATTGG CAGACTTATA CTGATGTAAA ATGTACTGTC
AGCGGGGCAA CAGGAAAACA TGATGTATAC CTTGTATTTA AAGGAGATAG CGGATATTTA
TTCAACCTTA ATTGGTTCAC ATTTACTCCA GGAAGTGTCA ATACGGGTAC ATTGGGTGAT
TTAAATTCCG ACGGACAAGT AGACGCGATA GATTTACAGT TATTGAAAAA GTATATTTTA
GGACTGGGAG CAATCGAAAA TACAAAACTG GCAGATTTGG ATGCCAACGG AGATATCAAT
GCAATAGATT TTTCACTGCT GAAACAATTC TTACTAGGCA TAAGGACCAG CTTTCCGGGG
CAGGGGGCAG CATAA
 
Protein sequence
MKKVRTVSTI IFLGLMITVI MVLNTGAWDN GLAKTPPMGW NSWNIFHGDI NETKIKQIAD 
TMVSSGMKEA GYVYLNLDDN WMANPARDSN GNLRADPTRF PSGIRALADY VHAKGLKLGI
YGCRGTMTCM NIPQSGSKGY EDKDAKTFAS WGIDYLKYDN CNIPNGSDMK TDYQKMQTAL
ANCGRPIVFS ICAWGYQSWM PATGNLWRTT GDIADKWDNG NEWFKGIINA IDGNAQYTSS
AAPGAWNDPD MLEIGNGGCT TEEYRTQMSM WSMMASPLIA GNDIRTMSQT TKDILLNKEV
IAIDQDPAGV QGKRVKSANG LEIWVKPLGT NGTTKAVALL NRNSATSNIT VNWSDIGVSG
SVTVRDLWAK SDKGSFTGSY TASVPSHGTV LIKISTEPPA PVDATKQIEA ESYSNQSGIQ
TETCSEGGED VGFIENGDYT VYSNVDFGDG VGGFQARVAS ATSGGNIEIR LDSPAGTLIG
TCPVAGTGDW QTYTDVKCTV SGATGKHDVY LVFKGDSGYL FNLNWFTFTP GSVNTGTLGD
LNSDGQVDAI DLQLLKKYIL GLGAIENTKL ADLDANGDIN AIDFSLLKQF LLGIRTSFPG
QGAA