Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ccel_1233 |
Symbol | |
ID | 7310030 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium cellulolyticum H10 |
Kingdom | Bacteria |
Replicon accession | NC_011898 |
Strand | + |
Start bp | 1512213 |
End bp | 1514453 |
Gene Length | 2241 bp |
Protein Length | 746 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 643608154 |
Product | Carbohydrate binding family 6 |
Protein accession | YP_002505569 |
Protein GI | 220928660 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3507] Beta-xylosidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.555313 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAATTTA AAAAGGTCTT CAGTATTTTA TTGCTGGTAT GTCTATTGGT TACACAAACG ACTATAGTCG GTGCATGGCA GTCTGATAAT GACAACGGTA CCTACACAAA CCCGATTTTA AACGCTGATT ATCCTGATAT TTATGCTATC AGGGTGGGAA GTGATTACTA TATGGTCAGC TCCACTTTCG TATCATTTCC ATCAATACCT ATCCTTCATT CAAAGGATTT AATTAACTGG GAAATTATAG GATATGTTTC TTCGGATCTT AACGGTACAG GAAAATCTTA TAATCTGACT AATACATTTG ACGATTACGG ACATGGCTGT TGGGCACCAA GCATTGCCTA CCGTAACGGT ACATATTATG TGGGAATATA TCAGGCACAG GGGAAGTTCA TCATGTGTAC CGCCACAAAT CCGGCCGGCC CTTATACAAA AACGGTATAC AATCAAGGAT TTCATGACCC GGCACTTTTT ATTGATGACG ACGGTACAGG ATATATCGTC TCTGAAGCAA ACGATGTAAA GGTTACGAAG CTAAGTGCTG ATTATAAGTC GGTAGTGAAC AGTCAGGTGA CTACCCGTAT TGAGGGTGCA ACAGGAAATT ACCTGGTTGA AGGCACACAT GTTATGAAAA AGAACGGATA TTATTACATA TTCCGTAATT CAACTCCTCC AGAATCATAT ACGTACTGCC TCAGGTCAAA GAGTATATAT GGCCCTTATG AAATGAGGAT ACTACTGAAC GGTCCAAGCA TTTCCGGCGG AAGTCAGATT CACCAGGGGG GACCTATAGA TACTACAACT GGTGAGTGGT GGTTCTATGT ATTTCAGGAT GGACAGGGAT TGGGCCGCAG AGACATTTTG ATACCTATGC AGTGGCAGAA TGACTGGCCG ATTCTCGGAG ACCCTTCTAC AGTAAAAAAT GTAAGCATAG CAGGAAAAAC CTATCCTATG GGTACCGTAC CGGTTACATA TAAAAAACCG GATGTAGGTG CAACATACCC AATCCTTACA ATTCCGAATT CTGATGAATT CAGTTCAACA ACAATGGGAG TACAGTGGCA GTGGAATCAT TACCCTGACA ATACAAAGTG GTCTTTAAGC GAGCGACCGG GCTATCTCAG ACTTCACGCT AAAAATGCAA ATAATCTGTG GAGGGCCACT AACACTCTTA CACAAAGAGT GGAAGGGCCG GATTGCCAGG GTACAATAGA GCTTGACACT ACCAATATGT TAGATGGGGA TAATGCTGGA CTATGCCTGC TTAATATTCC GTATGGAACC ATCGGGGTAA GCAAATCCGG CGGAGTAAAA AGGATAGTTG CCAATATCAA CGCTAAAAAG GATACGGCAG GAACAATTAC AAATGGTCCT ACACTTACCG GAAATACTGT CTATTTAAGG GCTAAAGCAG ATCTTATCAG TAATAAGGCA ACTTTTTTCT ATAGCACGGA TAATGTGAAC TTCACTCAGC TTGGAGGAAC ATTAAGTATG CCCTTTGACT TGGGATTTTT TCAGGGGGAC AAGTTCGGTA TATTCAATTA TACAACTGCT TCCTCGGGAG GTTATGCAGA TATTAACTGG TTCCGATATT ATACTTCTGC GGGGCCAAAT ACTCCTATTC CTGACATTAC GTTATCTGCC TTTGAAAAAA TAGAAGCAGA AAGCTACAAC TCCCAATCGG GAATCCAGAA TGTAACTTGT GATGAAGGAA CCGAGGCTGT AGGCTATACC GAAAACGGCG ATTACGTTGT ATATAAGAAT GTTGATTTCG GAAGCGGAGC AAATGGTTTT AACGCCAGAG TATCAAGTGC AACGGTTGGA GGTACGATTG AAATCAGGCT CGACAGTGCC AATGGTACAT TAATAGGTTC TTGCCCTGTT GCGGGAACGG GAGGGTGGCA AGCTTTTACA GATGCAAATT GTACCGTAAG TGGTGTAAGT GGTAAACATG ACCTATATTT GAAATTTACA GGTGAAAGCG GATATCTGTT TAACATCAAC TGGTTTAAAT TCAGTAATAC ATCTGTTATT TCAGATAAAT TAGGTGATGT TAATTCTGAC GGACAGATTG ATGCCATTGA CTTACAGCTC ATTAAAAAAT ATATCCTGGG ATTGGGAGAA ATCGAGAACA TAAAAACTGC TGACCTGGAT GGAAACGGCG ATGTAAATGC AATTGATTTT TCCCTTATGA AACAGTACTT ACTGGGGCTA ATTACCGAGT TTCCAGGGTG A
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Protein sequence | MQFKKVFSIL LLVCLLVTQT TIVGAWQSDN DNGTYTNPIL NADYPDIYAI RVGSDYYMVS STFVSFPSIP ILHSKDLINW EIIGYVSSDL NGTGKSYNLT NTFDDYGHGC WAPSIAYRNG TYYVGIYQAQ GKFIMCTATN PAGPYTKTVY NQGFHDPALF IDDDGTGYIV SEANDVKVTK LSADYKSVVN SQVTTRIEGA TGNYLVEGTH VMKKNGYYYI FRNSTPPESY TYCLRSKSIY GPYEMRILLN GPSISGGSQI HQGGPIDTTT GEWWFYVFQD GQGLGRRDIL IPMQWQNDWP ILGDPSTVKN VSIAGKTYPM GTVPVTYKKP DVGATYPILT IPNSDEFSST TMGVQWQWNH YPDNTKWSLS ERPGYLRLHA KNANNLWRAT NTLTQRVEGP DCQGTIELDT TNMLDGDNAG LCLLNIPYGT IGVSKSGGVK RIVANINAKK DTAGTITNGP TLTGNTVYLR AKADLISNKA TFFYSTDNVN FTQLGGTLSM PFDLGFFQGD KFGIFNYTTA SSGGYADINW FRYYTSAGPN TPIPDITLSA FEKIEAESYN SQSGIQNVTC DEGTEAVGYT ENGDYVVYKN VDFGSGANGF NARVSSATVG GTIEIRLDSA NGTLIGSCPV AGTGGWQAFT DANCTVSGVS GKHDLYLKFT GESGYLFNIN WFKFSNTSVI SDKLGDVNSD GQIDAIDLQL IKKYILGLGE IENIKTADLD GNGDVNAIDF SLMKQYLLGL ITEFPG
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