Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ccel_1231 |
Symbol | |
ID | 7310028 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium cellulolyticum H10 |
Kingdom | Bacteria |
Replicon accession | NC_011898 |
Strand | + |
Start bp | 1509068 |
End bp | 1510642 |
Gene Length | 1575 bp |
Protein Length | 524 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 643608152 |
Product | Carbohydrate binding family 6 |
Protein accession | YP_002505567 |
Protein GI | 220928658 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3507] Beta-xylosidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0177163 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAG TAAGCAAAAT TGCAGCTCTC TTATTAGTAC TTACTTTGTT TATTCCAACA GTAGGCTATG CAGACAATCC AATAGTGCAG ACTTTATATA CTGCTGACCC TGCCCCTATG ATATATAACG ATACATGCTA CGTGTACACG GGACATGACG AGGATACACT GGTAAATGAT TTCTTTACTA TGAATGACTG GAGATGTTAC TCCTCAACTG ATATGGTGAA TTGGACAGAT AACGGTTCGC CACTGTCATA CTCTTCGTTC AGTTGGGCAA AAGGGGATGC ATGGGCAGGC CAATGTATTC AAAGAAATGG AAAGTTTTAT TATTATGTTC CTTTGACCCC GAAAACCGGA GGGACGGCAA TCGGTGTTGC AGTATCAGAT AGCCCTACAG GCCCATTTAA AGATCCCCTT GGAAAACCAT TAGTTAGTAC TGGCAGCGGC GACATTGACC CGACAGTATA TATCGATGAT GACGGACAGG CTTATCTGTA CTGGGGCAAT CCAAACCTTT ACTATGTAAA GTTGAATCAG GATATGGTTT CCTACTCAGG CAGTATTGTA AAGGTACCTT TGACAACTGC AAGTTTCGGA ACAAGAAGTA AAACCGACAG ACCAACTACA TACGAGGAGG GACCATGGTT TTACAAGCGT AACAGTTTGT ACTATATGGT ATTTGCAGGC GGCCCCATAT CAGAGCATAT AGGTTATTCC ACCAGTACCG GGCCTACAGG GCCTTGGACT TATCGTGGTA AAATCATGCC TACCCAGGGC AGCAGCTTTA CAAATCATCC GGGGGTAGCC GATTTTAAAG GTAATTCCTA TTTCTTCTAT CACAATGGTG CTTTGCAGGG TGGAGGAGGG TTTCACCGTT CGGTGTGTGT AGAACAATTT AAATATAATG CTGACGGTAC TTTTCCAACC ATAAATATGA CTACAACCGG CTCTACCCAA ATCGGCAATC TTAATCCATT TATTAAAACT GAGGCGGAAA CAATCTGCTG GGAATCAGGT ATTGAAACGG AAAAGTGCAG TGAAGGCGGA ATGAATGTAG CCTTTATAGA AAATGGGGAC TATATAAAGG TAAAAGGTGT TGATTTTGGT ACGGGTGCAG CAGCCTTTAC TGCCAGAGTT GCTTCTGCAA CCGACGGCGG GAATCTAGAA CTTCGGCTTG ACAGCCCAAC AGGTAAACTT GTGGGGACTT GTGCAGTTAC AAGCACAGGA GGATGGCAGA CATGGGTCGA TAAGACCTGT ACGGTAAGCG GTGCCGAGGG GATACATGAC TTGTACCTGA AATTTACAGG TGGAAGCGGT TATCTGTTCA ATTTTAACTG GTGGAAGTTT ATCAAAGCTG GGAATACCTC TGTTATTGGA GATCTCAATG GAGACAAAAG CGTGGATGCG GCAGATTATG CCATGATGAA GAAATATCTT TTGGGATTAA TTGAAGATTT TCCGGCAGAA AACGATATTG AAGCCGGAGA CTTAAATAAA GACAGCGTCA TTGACGCACT TGATTTTGCA GTTTTTAAAA AATATCTGCT TGGTACAATT CCAAGTTTAC CATGA
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Protein sequence | MKKVSKIAAL LLVLTLFIPT VGYADNPIVQ TLYTADPAPM IYNDTCYVYT GHDEDTLVND FFTMNDWRCY SSTDMVNWTD NGSPLSYSSF SWAKGDAWAG QCIQRNGKFY YYVPLTPKTG GTAIGVAVSD SPTGPFKDPL GKPLVSTGSG DIDPTVYIDD DGQAYLYWGN PNLYYVKLNQ DMVSYSGSIV KVPLTTASFG TRSKTDRPTT YEEGPWFYKR NSLYYMVFAG GPISEHIGYS TSTGPTGPWT YRGKIMPTQG SSFTNHPGVA DFKGNSYFFY HNGALQGGGG FHRSVCVEQF KYNADGTFPT INMTTTGSTQ IGNLNPFIKT EAETICWESG IETEKCSEGG MNVAFIENGD YIKVKGVDFG TGAAAFTARV ASATDGGNLE LRLDSPTGKL VGTCAVTSTG GWQTWVDKTC TVSGAEGIHD LYLKFTGGSG YLFNFNWWKF IKAGNTSVIG DLNGDKSVDA ADYAMMKKYL LGLIEDFPAE NDIEAGDLNK DSVIDALDFA VFKKYLLGTI PSLP
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