Gene Ccel_1152 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCcel_1152 
Symbol 
ID7309960 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium cellulolyticum H10 
KingdomBacteria 
Replicon accessionNC_011898 
Strand
Start bp1414371 
End bp1416872 
Gene Length2502 bp 
Protein Length833 aa 
Translation table11 
GC content35% 
IMG OID643608074 
Productprotein of unknown function DUF214 
Protein accessionYP_002505489 
Protein GI220928580 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG4591] ABC-type transport system, involved in lipoprotein release, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAATT ATTCAACACT TACCTCTCGG TATTTGAAAA AGCATAAAGG CAGGACTATA 
TTGACTCTTA TCGGGATTAT TATAGCCATA GCCATGTTTA CGGCTATAGG AAGTATTTAC
TATAGTGGAG TGGACAGTGA AATTAAAAAT GCCAAGGCAA ACGGTGATTA TCAAGTTTAC
TTTTACGATT TGGGAAAAGA AAATGTTAAT GCATTATATT CCAATGCAGA GTTTAAAAAC
GGTGGAGTAA TAAAACTGGA AGGCAAATAT AAGTTTGAAA ACGATAAACT GACAGAATCG
TTGAGAACCC TTGATATAAA AAGCTATGAT GCTGCTGCCT TTAAAGATAT ATTCAAAGTC
AAATTGTTAG AAGGAAGACT TCCTAGGAAC AGCTCCGAAA TAGTGATTGA CAAAAAATTA
AGTGCTGTTT TAAAAGATAA AAAAATAAGC AATGCGCTAA AAGGTACGTT GGCCGATAAG
AACTCATCAA GTGGGAAAGA TTATACTATT GTAGGGGTAT ATGACAGCAA CTATATTACT
AACACTGCAT TGAGCTATCT GGATATCAAG ACTTCTTCTG ACTCGAAGGA TTATTTCTTT
TATGCAAATA TGAAAAGCGA AAAGAATATA GTAGATAATG CACAAAAAAT AGCAAAAGCA
AATAATGTAA AACTGGAAAC AAACACACTC CTTTTATACC TTATGGGTGA AGGGCCTGAC
AAAACCAGAA ACGATAGCAT GGACCAGATA TTTGCTATAA TTGCAGGATT CGTTGTTATC
TGTACGGTGG TTGTTATATA TAATTCATTC AATATATCTG TAATGGAAAG AATCAAGCAT
TTCGGCATAC TTCGGAGTAT CGGAGCAACC AAAGCCCAGA TAAGAAGGTT GGTTTTTAAG
GAAGCTGCAA TAATGAGTGC GATATCCATA CCAATAGGTA TTATTGCAGG CTTTGCTGGA
ATATTTATCA CCTTTAGACT CTTTATGAAT GGCTTCCTTG GAGCTTTTGA GATTGGATTC
TATCCGAAGG TAATTATTGT TGCTGCAATT TTAGGAATTT TTACAGTATT TATTTCTGCA
TTTTTCCCGG CAAGGACAGC GTCAAAGGTT TCCCCCATAG ATGCAATAAG GGGTACTGTA
GTTGTTAAAG GAGACAAGGC AAAAAGAAGA GGCGGGCGTT GGGCCAGACT GCTTTTCAGT
TTTGAAGGGC AGGTTGCATA CAAGAACATT AAAAGAAATC GAAAGAGGTT TTATGTTACC
TGTATATCAC TTATGATATC CATTGTAATG TTCGTATTTT TCTCTAATTT TATAGATATA
TTTGTCCAGA GCAATAAAAT AGCAAATCAG GCAATAAGGG TTGAAGCTAC TTTTGCTGAC
ACCAGCGATG TCAATCTGGC AGGAAATCTT CCAAAACAGG TTAAGGAACT GGACGGGATT
AAAGAAATAT ATGAAATGAC CAACAAGTAC ATTACGTATA CCCTTGATAA AAAAATGCTT
TCAGACAAAT TTGTTAATTC GTTAAACTAC AACACAAAGC TTGAAGAATA TGGACAGAAC
TATTTTATAA ATAGTGTCAG GCTGTTAGGC TATGATGAGA ATTGCCTCAA GCTCTTCAAC
AAAGAAAACA AAACAAATAT TGAATATGAT AGCTTTAAAA ATAATAATGA GGTAATCATT
GTAAACAAGG CAAGGGGCAG TCAGGATAAA ACTACAATTT TTGACAGCTT TACAAAGTAC
AAAGTAGGGG ATGAAATAAA AATGCCTGTT TTAAACAGCA GCTATTTAAA AAATCCTGAT
ACCGAACAGC TAAAGCGTCT TATTGATAAC GGTAAAACAA TTACCTTTAA GGTAGCTGGT
GTTGTTGATT ATGAGGCAGT ATTACAAAAT ATTCCATACA ATAGTTTTGG CATGATAATG
TCCCATGACA GTTTTGAGAG ACTGACAGGT ACAAGCGAAA TATCAATAAT AGCATTAAAT
TTTGATTCGC CTGAATATGC AGAGAAAAAT TATGAGAAGC TCAATATGCT TGCTGACGAA
AACAAGGCAC AATACATTGA CATAAACAAG CAGAAAAAGC AGTTTGACGA TCTGATGAAT
CAGATGATGA TTCTTGTTTA CGGATTCATC AGCCTTATAA TACTTATATC TACTGTAAAT
ATAATTAATA CGATAACAAT CAATCTTCTT GTCAAAAAGA GAGAGTACGC TACTTTTAAG
GCTATTGGTA TGACAAAGGG TCAGTTTCAG AAGTTGGTTT TGCTTGAGGG AGCCTTATTT
GGATTAATTG CTTGTATAAT AGGACTGCCT ATCGCCTTCC TTCTTACCTA TTTTGGTATT
ATCAATAACA ATCCTCTTGG CGACATAGGT TACCGAGCGG CTTGGTGGCC GTACTTATAC
GGAGGCCTTG GAGTGATAGT GATTACACTT TTAGCAGCAC TGTTCCCATT GCGCAAACTA
AATGATATGA ACATTGTGGA ATCTCTTCGT GTAGAGGAAT AA
 
Protein sequence
MKNYSTLTSR YLKKHKGRTI LTLIGIIIAI AMFTAIGSIY YSGVDSEIKN AKANGDYQVY 
FYDLGKENVN ALYSNAEFKN GGVIKLEGKY KFENDKLTES LRTLDIKSYD AAAFKDIFKV
KLLEGRLPRN SSEIVIDKKL SAVLKDKKIS NALKGTLADK NSSSGKDYTI VGVYDSNYIT
NTALSYLDIK TSSDSKDYFF YANMKSEKNI VDNAQKIAKA NNVKLETNTL LLYLMGEGPD
KTRNDSMDQI FAIIAGFVVI CTVVVIYNSF NISVMERIKH FGILRSIGAT KAQIRRLVFK
EAAIMSAISI PIGIIAGFAG IFITFRLFMN GFLGAFEIGF YPKVIIVAAI LGIFTVFISA
FFPARTASKV SPIDAIRGTV VVKGDKAKRR GGRWARLLFS FEGQVAYKNI KRNRKRFYVT
CISLMISIVM FVFFSNFIDI FVQSNKIANQ AIRVEATFAD TSDVNLAGNL PKQVKELDGI
KEIYEMTNKY ITYTLDKKML SDKFVNSLNY NTKLEEYGQN YFINSVRLLG YDENCLKLFN
KENKTNIEYD SFKNNNEVII VNKARGSQDK TTIFDSFTKY KVGDEIKMPV LNSSYLKNPD
TEQLKRLIDN GKTITFKVAG VVDYEAVLQN IPYNSFGMIM SHDSFERLTG TSEISIIALN
FDSPEYAEKN YEKLNMLADE NKAQYIDINK QKKQFDDLMN QMMILVYGFI SLIILISTVN
IINTITINLL VKKREYATFK AIGMTKGQFQ KLVLLEGALF GLIACIIGLP IAFLLTYFGI
INNNPLGDIG YRAAWWPYLY GGLGVIVITL LAALFPLRKL NDMNIVESLR VEE