Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ccel_1152 |
Symbol | |
ID | 7309960 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium cellulolyticum H10 |
Kingdom | Bacteria |
Replicon accession | NC_011898 |
Strand | + |
Start bp | 1414371 |
End bp | 1416872 |
Gene Length | 2502 bp |
Protein Length | 833 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 643608074 |
Product | protein of unknown function DUF214 |
Protein accession | YP_002505489 |
Protein GI | 220928580 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAAATT ATTCAACACT TACCTCTCGG TATTTGAAAA AGCATAAAGG CAGGACTATA TTGACTCTTA TCGGGATTAT TATAGCCATA GCCATGTTTA CGGCTATAGG AAGTATTTAC TATAGTGGAG TGGACAGTGA AATTAAAAAT GCCAAGGCAA ACGGTGATTA TCAAGTTTAC TTTTACGATT TGGGAAAAGA AAATGTTAAT GCATTATATT CCAATGCAGA GTTTAAAAAC GGTGGAGTAA TAAAACTGGA AGGCAAATAT AAGTTTGAAA ACGATAAACT GACAGAATCG TTGAGAACCC TTGATATAAA AAGCTATGAT GCTGCTGCCT TTAAAGATAT ATTCAAAGTC AAATTGTTAG AAGGAAGACT TCCTAGGAAC AGCTCCGAAA TAGTGATTGA CAAAAAATTA AGTGCTGTTT TAAAAGATAA AAAAATAAGC AATGCGCTAA AAGGTACGTT GGCCGATAAG AACTCATCAA GTGGGAAAGA TTATACTATT GTAGGGGTAT ATGACAGCAA CTATATTACT AACACTGCAT TGAGCTATCT GGATATCAAG ACTTCTTCTG ACTCGAAGGA TTATTTCTTT TATGCAAATA TGAAAAGCGA AAAGAATATA GTAGATAATG CACAAAAAAT AGCAAAAGCA AATAATGTAA AACTGGAAAC AAACACACTC CTTTTATACC TTATGGGTGA AGGGCCTGAC AAAACCAGAA ACGATAGCAT GGACCAGATA TTTGCTATAA TTGCAGGATT CGTTGTTATC TGTACGGTGG TTGTTATATA TAATTCATTC AATATATCTG TAATGGAAAG AATCAAGCAT TTCGGCATAC TTCGGAGTAT CGGAGCAACC AAAGCCCAGA TAAGAAGGTT GGTTTTTAAG GAAGCTGCAA TAATGAGTGC GATATCCATA CCAATAGGTA TTATTGCAGG CTTTGCTGGA ATATTTATCA CCTTTAGACT CTTTATGAAT GGCTTCCTTG GAGCTTTTGA GATTGGATTC TATCCGAAGG TAATTATTGT TGCTGCAATT TTAGGAATTT TTACAGTATT TATTTCTGCA TTTTTCCCGG CAAGGACAGC GTCAAAGGTT TCCCCCATAG ATGCAATAAG GGGTACTGTA GTTGTTAAAG GAGACAAGGC AAAAAGAAGA GGCGGGCGTT GGGCCAGACT GCTTTTCAGT TTTGAAGGGC AGGTTGCATA CAAGAACATT AAAAGAAATC GAAAGAGGTT TTATGTTACC TGTATATCAC TTATGATATC CATTGTAATG TTCGTATTTT TCTCTAATTT TATAGATATA TTTGTCCAGA GCAATAAAAT AGCAAATCAG GCAATAAGGG TTGAAGCTAC TTTTGCTGAC ACCAGCGATG TCAATCTGGC AGGAAATCTT CCAAAACAGG TTAAGGAACT GGACGGGATT AAAGAAATAT ATGAAATGAC CAACAAGTAC ATTACGTATA CCCTTGATAA AAAAATGCTT TCAGACAAAT TTGTTAATTC GTTAAACTAC AACACAAAGC TTGAAGAATA TGGACAGAAC TATTTTATAA ATAGTGTCAG GCTGTTAGGC TATGATGAGA ATTGCCTCAA GCTCTTCAAC AAAGAAAACA AAACAAATAT TGAATATGAT AGCTTTAAAA ATAATAATGA GGTAATCATT GTAAACAAGG CAAGGGGCAG TCAGGATAAA ACTACAATTT TTGACAGCTT TACAAAGTAC AAAGTAGGGG ATGAAATAAA AATGCCTGTT TTAAACAGCA GCTATTTAAA AAATCCTGAT ACCGAACAGC TAAAGCGTCT TATTGATAAC GGTAAAACAA TTACCTTTAA GGTAGCTGGT GTTGTTGATT ATGAGGCAGT ATTACAAAAT ATTCCATACA ATAGTTTTGG CATGATAATG TCCCATGACA GTTTTGAGAG ACTGACAGGT ACAAGCGAAA TATCAATAAT AGCATTAAAT TTTGATTCGC CTGAATATGC AGAGAAAAAT TATGAGAAGC TCAATATGCT TGCTGACGAA AACAAGGCAC AATACATTGA CATAAACAAG CAGAAAAAGC AGTTTGACGA TCTGATGAAT CAGATGATGA TTCTTGTTTA CGGATTCATC AGCCTTATAA TACTTATATC TACTGTAAAT ATAATTAATA CGATAACAAT CAATCTTCTT GTCAAAAAGA GAGAGTACGC TACTTTTAAG GCTATTGGTA TGACAAAGGG TCAGTTTCAG AAGTTGGTTT TGCTTGAGGG AGCCTTATTT GGATTAATTG CTTGTATAAT AGGACTGCCT ATCGCCTTCC TTCTTACCTA TTTTGGTATT ATCAATAACA ATCCTCTTGG CGACATAGGT TACCGAGCGG CTTGGTGGCC GTACTTATAC GGAGGCCTTG GAGTGATAGT GATTACACTT TTAGCAGCAC TGTTCCCATT GCGCAAACTA AATGATATGA ACATTGTGGA ATCTCTTCGT GTAGAGGAAT AA
|
Protein sequence | MKNYSTLTSR YLKKHKGRTI LTLIGIIIAI AMFTAIGSIY YSGVDSEIKN AKANGDYQVY FYDLGKENVN ALYSNAEFKN GGVIKLEGKY KFENDKLTES LRTLDIKSYD AAAFKDIFKV KLLEGRLPRN SSEIVIDKKL SAVLKDKKIS NALKGTLADK NSSSGKDYTI VGVYDSNYIT NTALSYLDIK TSSDSKDYFF YANMKSEKNI VDNAQKIAKA NNVKLETNTL LLYLMGEGPD KTRNDSMDQI FAIIAGFVVI CTVVVIYNSF NISVMERIKH FGILRSIGAT KAQIRRLVFK EAAIMSAISI PIGIIAGFAG IFITFRLFMN GFLGAFEIGF YPKVIIVAAI LGIFTVFISA FFPARTASKV SPIDAIRGTV VVKGDKAKRR GGRWARLLFS FEGQVAYKNI KRNRKRFYVT CISLMISIVM FVFFSNFIDI FVQSNKIANQ AIRVEATFAD TSDVNLAGNL PKQVKELDGI KEIYEMTNKY ITYTLDKKML SDKFVNSLNY NTKLEEYGQN YFINSVRLLG YDENCLKLFN KENKTNIEYD SFKNNNEVII VNKARGSQDK TTIFDSFTKY KVGDEIKMPV LNSSYLKNPD TEQLKRLIDN GKTITFKVAG VVDYEAVLQN IPYNSFGMIM SHDSFERLTG TSEISIIALN FDSPEYAEKN YEKLNMLADE NKAQYIDINK QKKQFDDLMN QMMILVYGFI SLIILISTVN IINTITINLL VKKREYATFK AIGMTKGQFQ KLVLLEGALF GLIACIIGLP IAFLLTYFGI INNNPLGDIG YRAAWWPYLY GGLGVIVITL LAALFPLRKL NDMNIVESLR VEE
|
| |