| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccel_1043 |
|---|
| Symbol | |
|---|
| ID | 7309865 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium cellulolyticum H10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011898 |
|---|
| Strand | + |
|---|
| Start bp | 1298723 |
|---|
| End bp | 1299601 |
|---|
| Gene Length | 879 bp |
|---|
| Protein Length | 292 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 643607970 |
|---|
| Product | Haloacid dehalogenase domain protein hydrolase type 3 |
|---|
| Protein accession | YP_002505385 |
|---|
| Protein GI | 220928476 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0561] Predicted hydrolases of the HAD superfamily |
|---|
| TIGRFAM ID | [TIGR01484] HAD-superfamily hydrolase, subfamily IIB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATTAATAAGT ATCTTTACAT AAGCGATTTG GATGGAACAT TGTTAAGTAG CAATGCGTGC
ATGCTGGATG AATCTATTTA TAGATTGAAT CGTATGATAT GTGACGGTCT TATGTTTACG
TTTGTTACAG CAAGAGATTG GTTAAGTTCA AGAGAAATTA TGTCTGAAGT CAATTTGACA
TTACCTGTTT CAGTGTGTAA CGGAAGAGCG GTTGTAGATT TTCAAACAGG AAAAATGCAA
AAGGGCTATT ACATAAAGAG TGATAAGGTG ATGAAAATCA TACAGACAGC TTATCAATAT
TCTCTATTTC CCAATATAAG TGTATATCAT CAGGGGCGTA TTCAGACTTG CTATGTTGCT
GTACATCAAC GTAGTAATAG GGATTATTAT CTGAACAGGC TAAAAATGAA AGAAAGTATG
ACATTTCAAG TTCCATCTAT TAATGAAGCA ATAACTGAAA ATGTTATTTC AATTGCTTTT
GTGGATTCAA GGGACAAAAT AAGAAAATTT TGTGCTGCTT TTGATTATAA AAATCAAGAA
TCTCTAAGTA TTCATGTATA CAATGATCCA TTTGATAAAA CCATAGAAAT TGTAGATATA
TTATCCGATA CAGCATCAAA AGGTGTTGCT GCAAGTGATA TAGCGAATTT ATGCGGTATT
TTTGCAAAGG AGCAGATTGT TTCTTTTGGA AATGACGAGA ATGACATAGA ACTCCTTAAA
GCTTCCGGCA CAGGAGTTGC TGTGGGTGAC AATTTGGGTT TATTGGCTGA GTATACGGCT
ATTTGCTTGA ATTACCAAGA AGGTTTGTCT GTTTTAGATT TTTTGGAACA GCATTTTTAC
AATAAAAACT ATGAAAGAAA GGTTGTGATA CAAAAATGA
|
|---|
| Protein sequence | MNKYLYISDL DGTLLSSNAC MLDESIYRLN RMICDGLMFT FVTARDWLSS REIMSEVNLT
LPVSVCNGRA VVDFQTGKMQ KGYYIKSDKV MKIIQTAYQY SLFPNISVYH QGRIQTCYVA
VHQRSNRDYY LNRLKMKESM TFQVPSINEA ITENVISIAF VDSRDKIRKF CAAFDYKNQE
SLSIHVYNDP FDKTIEIVDI LSDTASKGVA ASDIANLCGI FAKEQIVSFG NDENDIELLK
ASGTGVAVGD NLGLLAEYTA ICLNYQEGLS VLDFLEQHFY NKNYERKVVI QK
|
|---|
| |