Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ccel_0880 |
Symbol | |
ID | 7309723 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium cellulolyticum H10 |
Kingdom | Bacteria |
Replicon accession | NC_011898 |
Strand | - |
Start bp | 1057542 |
End bp | 1058312 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 643607817 |
Product | ABC transporter related |
Protein accession | YP_002505232 |
Protein GI | 220928323 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0392492 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTTACA TAGTCGAAAT TAAAAATATA GGAATGAACT ACCAATCCCT AAATGGCGAA ATTCCTGCCA TAGCTGGTAT TAGTATGAAT ATATCCAAGG GCGAATTTAT CTGCATAGTA GGACCCAGCG GTTGCGGCAA GTCCACACTT TTATCTATTA TTGCCGGTCT CATCAAGCCT TCTAGCGGAA GCATTGTTAT AAACAGTGGT TGTAAAGGTA AATGTCTGCT GGATGTGGGT TATATGCTTC AAAAAGATTA TCTCTTTGAA TGGAGCACTA TTCTTGAAAA TGTCATGCTG GGACTAGAAA TCAAAAAGGC CCTTAACACT GAAAACAGGG AGTATGTTTA TAATCTTCTT GATACATACG GACTTAGTGA GTTTAAAGAT AAATACCCTT CTCAGCTGTC AGGAGGAATG AGGCAGCGTG CAGCCCTGAT AAGAACCTTG GCTTTAAGGC CGGAAATACT TCTTTTAGAT GAAGCATTTT CTGCCCTGGA TTACCAGACC AGATTAGCAG TGACCGAGGA TATATATTAT ATAATTAAAA AAGAAAACAA AACAGCGATT ATGGTTACCC ATGACATAGC TGAAAGTATA AGCATGGCTG ACAGAATTTT TGTTCTTACC GGAAGACCCT CATCCATAAA ATGTGAGTAC GACATATCGT TAACCTGCAA TGACGTAAGA ACCCCATTTA ACAGCCGTGA AGCTCCCGAA TTCAGACATT ATTTTAATAA AATATGGGAG GAGCTGGATG TACATGTTTA A
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Protein sequence | MSYIVEIKNI GMNYQSLNGE IPAIAGISMN ISKGEFICIV GPSGCGKSTL LSIIAGLIKP SSGSIVINSG CKGKCLLDVG YMLQKDYLFE WSTILENVML GLEIKKALNT ENREYVYNLL DTYGLSEFKD KYPSQLSGGM RQRAALIRTL ALRPEILLLD EAFSALDYQT RLAVTEDIYY IIKKENKTAI MVTHDIAESI SMADRIFVLT GRPSSIKCEY DISLTCNDVR TPFNSREAPE FRHYFNKIWE ELDVHV
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