Gene Ccel_0820 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCcel_0820 
Symbol 
ID7309667 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium cellulolyticum H10 
KingdomBacteria 
Replicon accessionNC_011898 
Strand
Start bp940698 
End bp941834 
Gene Length1137 bp 
Protein Length378 aa 
Translation table11 
GC content33% 
IMG OID643607762 
Productintegrase family protein 
Protein accessionYP_002505178 
Protein GI220928269 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAAGGA AAGCTATCGA GAGGAATATT TCTTATGATG ATGTCAAGAA GCTCTATTAT 
GTCACTATGG ATTATGGTAA GGATAGTACA GGGAAGAGGG TTAAAACTAC CAAGACATTT
GAAAAGAAAA AGGATGCTCA GACGGCATTG AAGAACTTTG AAGCGGATAA GATAAAACAG
AATCTGGTAT TTCCTTCAGT TCTGACAGTT GAGAACTGGC TTACATATTG GCTTGATGAT
ATTAAGGCTA TCAAATGTGA AGAAACAACT TTATACGGAT ATAGAAATAT AATAAATAAA
CATCTTATAC CTAAACTTGG TAACTATAAA CTTCAAGAAT TAAATCCAAC TATATTGAAT
AAATATTTTA AGGGAAAGCT TGATGAAAAA TTAAGCCAAA ATACAATTAG AAAACATTAT
GATTTATTGA AGGATACTTT AAAAACCGCT GTAGATGAAG AAAAAATTCT TAAAAATCCT
CTTAATAAAG TACCGCCAAT AAAGGTACAG AAGAATGAAA AGAATTTTTA TAATGTTGAG
CAGTTAAAAA CTTTATTTAC TATTGTTGAA AATGACCGTA TGGAAATTGT GGTCAAGCTT
GCAGGAATGT TGGGGTTAAG AAGGGAAGAA ATTGCAGGAC TTAAGTGGGA TAATATTGAT
TTAGAAAATA GAATAATAAC CATAGCCGAA GCAAGGACAC AGGCAGGCAA AAAGACAGTA
GCAAAGGGTA CTAAAAATAG TTCCTCCCAT AGAACATTAT ATGCACCGGA GGAAATAATA
AACCTTCTTA CGTCTATTAA AACCACACAA GAAGAGCAAA AAAGACTATT AGGAGAGGCT
TATAAGGATG AAGGGTATAT AATGGCATGG GAAAATGGAG AACCGTACAG ACCCAATTAT
TTAAGTGATT TATTCAAGAA AATTATAGAT GATAATAAGC TTCCTTCTCT CAGATTACAC
GATTTAAGAC ATACTTTTGC AAGCATAGCT AATGAATTAG GAACGAATTT ATATGACATT
AGTAAGGCTT TAGGACACTC ACAGGTAGGC ACTACAAGCC AAATATATAC ACATATGTTT
GATGCTACAC ATAAAAAGGC TATAAGTAAA ATTGCGGATG TAATGACTGC AAAGTAA
 
Protein sequence
MARKAIERNI SYDDVKKLYY VTMDYGKDST GKRVKTTKTF EKKKDAQTAL KNFEADKIKQ 
NLVFPSVLTV ENWLTYWLDD IKAIKCEETT LYGYRNIINK HLIPKLGNYK LQELNPTILN
KYFKGKLDEK LSQNTIRKHY DLLKDTLKTA VDEEKILKNP LNKVPPIKVQ KNEKNFYNVE
QLKTLFTIVE NDRMEIVVKL AGMLGLRREE IAGLKWDNID LENRIITIAE ARTQAGKKTV
AKGTKNSSSH RTLYAPEEII NLLTSIKTTQ EEQKRLLGEA YKDEGYIMAW ENGEPYRPNY
LSDLFKKIID DNKLPSLRLH DLRHTFASIA NELGTNLYDI SKALGHSQVG TTSQIYTHMF
DATHKKAISK IADVMTAK