Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ccel_0820 |
Symbol | |
ID | 7309667 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium cellulolyticum H10 |
Kingdom | Bacteria |
Replicon accession | NC_011898 |
Strand | + |
Start bp | 940698 |
End bp | 941834 |
Gene Length | 1137 bp |
Protein Length | 378 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 643607762 |
Product | integrase family protein |
Protein accession | YP_002505178 |
Protein GI | 220928269 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAAGGA AAGCTATCGA GAGGAATATT TCTTATGATG ATGTCAAGAA GCTCTATTAT GTCACTATGG ATTATGGTAA GGATAGTACA GGGAAGAGGG TTAAAACTAC CAAGACATTT GAAAAGAAAA AGGATGCTCA GACGGCATTG AAGAACTTTG AAGCGGATAA GATAAAACAG AATCTGGTAT TTCCTTCAGT TCTGACAGTT GAGAACTGGC TTACATATTG GCTTGATGAT ATTAAGGCTA TCAAATGTGA AGAAACAACT TTATACGGAT ATAGAAATAT AATAAATAAA CATCTTATAC CTAAACTTGG TAACTATAAA CTTCAAGAAT TAAATCCAAC TATATTGAAT AAATATTTTA AGGGAAAGCT TGATGAAAAA TTAAGCCAAA ATACAATTAG AAAACATTAT GATTTATTGA AGGATACTTT AAAAACCGCT GTAGATGAAG AAAAAATTCT TAAAAATCCT CTTAATAAAG TACCGCCAAT AAAGGTACAG AAGAATGAAA AGAATTTTTA TAATGTTGAG CAGTTAAAAA CTTTATTTAC TATTGTTGAA AATGACCGTA TGGAAATTGT GGTCAAGCTT GCAGGAATGT TGGGGTTAAG AAGGGAAGAA ATTGCAGGAC TTAAGTGGGA TAATATTGAT TTAGAAAATA GAATAATAAC CATAGCCGAA GCAAGGACAC AGGCAGGCAA AAAGACAGTA GCAAAGGGTA CTAAAAATAG TTCCTCCCAT AGAACATTAT ATGCACCGGA GGAAATAATA AACCTTCTTA CGTCTATTAA AACCACACAA GAAGAGCAAA AAAGACTATT AGGAGAGGCT TATAAGGATG AAGGGTATAT AATGGCATGG GAAAATGGAG AACCGTACAG ACCCAATTAT TTAAGTGATT TATTCAAGAA AATTATAGAT GATAATAAGC TTCCTTCTCT CAGATTACAC GATTTAAGAC ATACTTTTGC AAGCATAGCT AATGAATTAG GAACGAATTT ATATGACATT AGTAAGGCTT TAGGACACTC ACAGGTAGGC ACTACAAGCC AAATATATAC ACATATGTTT GATGCTACAC ATAAAAAGGC TATAAGTAAA ATTGCGGATG TAATGACTGC AAAGTAA
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Protein sequence | MARKAIERNI SYDDVKKLYY VTMDYGKDST GKRVKTTKTF EKKKDAQTAL KNFEADKIKQ NLVFPSVLTV ENWLTYWLDD IKAIKCEETT LYGYRNIINK HLIPKLGNYK LQELNPTILN KYFKGKLDEK LSQNTIRKHY DLLKDTLKTA VDEEKILKNP LNKVPPIKVQ KNEKNFYNVE QLKTLFTIVE NDRMEIVVKL AGMLGLRREE IAGLKWDNID LENRIITIAE ARTQAGKKTV AKGTKNSSSH RTLYAPEEII NLLTSIKTTQ EEQKRLLGEA YKDEGYIMAW ENGEPYRPNY LSDLFKKIID DNKLPSLRLH DLRHTFASIA NELGTNLYDI SKALGHSQVG TTSQIYTHMF DATHKKAISK IADVMTAK
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