| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccel_0724 |
|---|
| Symbol | |
|---|
| ID | 7312139 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium cellulolyticum H10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011898 |
|---|
| Strand | + |
|---|
| Start bp | 834215 |
|---|
| End bp | 834949 |
|---|
| Gene Length | 735 bp |
|---|
| Protein Length | 244 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 643607663 |
|---|
| Product | transcriptional regulator, GntR family |
|---|
| Protein accession | YP_002505083 |
|---|
| Protein GI | 220928174 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2188] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATAAATA AATTTAGTAG TATACCATTG TATCTGCAAT TAAAAGATTT GATAATTAAA
AAAATAGAAA ACAATGAATT TCCCCCAAAC TCACAAATTC CTTCTGAACA GGATTTATGC
CAGATGTATG ACATAAGCAG GCCAACTGTC AGGCAGGCTG TGAGTGAGCT GACAAACAGC
GGTTATCTGT ACAAGGAAAA GGGAAGGGGA ACGTTTGTTT ATGGCAGGAA AAACGTAATT
GATATTAAAA ATTATAGCGG GTTTACAGAT TCAATACTAG ACTGCCAGAT TCCTGCTGAG
AAGAATATTA TTGATTTGAA GGAAATAGAA AGTACATCTA ATGGTCGACT CAATGAAATA
TTTAACTACA ATTCAAGTAT TGCAGTTGCA CAAATAACAT ATTTGTCATT TATAAATAAA
AATGAGGTTT ATTCTCTAAA TAAATCTTAT ATATCACTAA GTCTTTTCCC GGATATTATA
TCCCAATTGA AGGACGGAAA ATCCTCTATA GATATTTTAA GGGGGAAATA TCCATTAATT
CCTGATAAAA GCAAGAGTGT ACTTGAAATT ATATTTGCCG ACCAAATTGA CTCACCACTG
CTGAGAGTGC AGCCGGGTCA ACCCCTTATT AAGCTTCAGA ATACACTATT TTCTAAAAGT
GGTCAGCCCG TTGAATATAT TATATCAAAA TACAGGGCAG ATAATTGCAG ATTATTGTTT
GAAAATAGTA AATAA
|
|---|
| Protein sequence | MINKFSSIPL YLQLKDLIIK KIENNEFPPN SQIPSEQDLC QMYDISRPTV RQAVSELTNS
GYLYKEKGRG TFVYGRKNVI DIKNYSGFTD SILDCQIPAE KNIIDLKEIE STSNGRLNEI
FNYNSSIAVA QITYLSFINK NEVYSLNKSY ISLSLFPDII SQLKDGKSSI DILRGKYPLI
PDKSKSVLEI IFADQIDSPL LRVQPGQPLI KLQNTLFSKS GQPVEYIISK YRADNCRLLF
ENSK
|
|---|
| |