| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccel_0706 |
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| Symbol | |
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| ID | 7312137 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium cellulolyticum H10 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011898 |
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| Strand | - |
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| Start bp | 817223 |
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| End bp | 818875 |
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| Gene Length | 1653 bp |
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| Protein Length | 550 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 643607645 |
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| Product | oligopeptide transporters, OPT superfamily |
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| Protein accession | YP_002505065 |
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| Protein GI | 220928156 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1297] Predicted membrane protein |
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| TIGRFAM ID | [TIGR00728] oligopeptide transporters, OPT superfamily
[TIGR00733] putative oligopeptide transporter, OPT family
[TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000176165 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAACAATC GTGAAAGGAA TTTTTTGGGA GTACAGCAAT TGTCACTCAG GAGTTTAATA
ATTGGTTCTC TTGGTTCGTG TGTTATAACG GCAAGTTCCA TGTATGTTGC ATTGAGAATG
AGTGCACTTC CATGGCCCAC TATTTTTGTA GCTGTTTTAT CAATGGGACT TCTTAAGCTT
TTTGGAAAAA CCACAAACAA TGAAATTAAT ATAACACAGA CAGCAATGTC TGCTGGTGCA
ATGGTTGCAG GCGGCCTTGC TTTTACTCTG CCGGGCTTAT GGATTATGGG TATATGGAAA
GGGTCTGCGA ATTTTTCATC AAACTATGTT AAAGTATTAG CCATTGCTAT TGCAGGTATG
CTTTTGGGAA GCGTTACTTC CTACATTCTG CGGTACAGAT TTATTGTAAA AAATGCTCTG
CCCTTTCCGA TCGGGCAAGC TGCGGCAGAA ACTATAAAAG CAGGTGACGA AGGCGGTAAA
AAATCCATAG TTCTTTTCGG AACAATGCTT GTTTCAACGA TTTATACATT TCTAAGGGAT
CAGGCAAGAC TAGTTCCTGA AGCATTTATG TTTAATAAAA ACTCAACTCT TGGTATATGG
AATTCGCCTA TGGCAATTGG TATGGGATAC ATTCTCGGAA CACTGTATAC CGGAGTTTGG
TTTCTGGGAG CATTATTTTC ATACGCGTTT GTCATTCCAT TCGGCCCAAG GTTGGGGTTA
TTTCCTAGTA AAGAAGCTGC ATCATCATTT ACAATCAGTA CCGGTATTGG ACTTCTGGTA
GGTACAGGTC TTGGAATTCT ATTGGGAATC ATCTATTCAT ATATAAAAAA GCTTAAAAAC
AGACAAAAGG ATATATCCTC AGAAAAAGCC GAAACCTATA AAAATAAAAA GAGTATTTTC
AATCTCAGCA GAATTCTTAT TGTATCAGGT AGTGTGACTG CTTTCTTTTT TACAGTTGTC
GCCGGAATTC CTGTGTTGCC TTCCGTTTTG ATGATTTTAG GGATTTACAT TGTTTCTCTG
ATGGCTGCAA CTATTACCGG ACAGACAGGT ATAAATCCTA TGGAAATATT TGGTATAATT
ATACTTTTGG CTGTAAGGAT TTTTGTTAAT ATCGATGCCA TGGATGCACT GATGATTGCC
GCTTGCACTG CCATTGCAAG CGGTTTTTCG GGAGATTTGT TCAATGATTA TAAGGCAGGA
GAGGTGCTTG GAACAAACCC GAAGGCACAG CTTATATCTC AGATTATTGG AGGCGTTGTG
GGTACTGTTG TGGCATCCCT TGCTTTATTT GCAATTATTA ATCAATTTGG TGAAGTCGGT
TCAAAAACTT CTCTTCCTGC CGCTCAAGCA GTAGGTGTTT CAGCTATGAT TAATGGAATA
GGAAATCCTG TTGTTTTTGG TATTGCTGTA GGAGTAGGTG CTATACTGTA TCTTTTTGGT
CTGCCCACTG CTACTCTCGG TATAGGAGTT TTCCTTCCAT TTACAATCTC ATCTGCCGTA
TTTTTAGGCG GAGTAATAAG GTTTATTGCA GACCGCAGAA AAAGCAAATC GTCAGATGAT
GACAAAGGCA CCGTTGCTGC TTCTGGACTC CTTGGAGGTG AAGGCATTAC AGGAGTGGGT
ATCGCTTTGG TTAAAATGTT TACAAGAGGG TAA
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| Protein sequence | MNNRERNFLG VQQLSLRSLI IGSLGSCVIT ASSMYVALRM SALPWPTIFV AVLSMGLLKL
FGKTTNNEIN ITQTAMSAGA MVAGGLAFTL PGLWIMGIWK GSANFSSNYV KVLAIAIAGM
LLGSVTSYIL RYRFIVKNAL PFPIGQAAAE TIKAGDEGGK KSIVLFGTML VSTIYTFLRD
QARLVPEAFM FNKNSTLGIW NSPMAIGMGY ILGTLYTGVW FLGALFSYAF VIPFGPRLGL
FPSKEAASSF TISTGIGLLV GTGLGILLGI IYSYIKKLKN RQKDISSEKA ETYKNKKSIF
NLSRILIVSG SVTAFFFTVV AGIPVLPSVL MILGIYIVSL MAATITGQTG INPMEIFGII
ILLAVRIFVN IDAMDALMIA ACTAIASGFS GDLFNDYKAG EVLGTNPKAQ LISQIIGGVV
GTVVASLALF AIINQFGEVG SKTSLPAAQA VGVSAMINGI GNPVVFGIAV GVGAILYLFG
LPTATLGIGV FLPFTISSAV FLGGVIRFIA DRRKSKSSDD DKGTVAASGL LGGEGITGVG
IALVKMFTRG
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