| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccel_0660 |
|---|
| Symbol | |
|---|
| ID | 7309523 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium cellulolyticum H10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011898 |
|---|
| Strand | + |
|---|
| Start bp | 762748 |
|---|
| End bp | 765120 |
|---|
| Gene Length | 2373 bp |
|---|
| Protein Length | 790 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 643607600 |
|---|
| Product | DEAD_2 domain protein |
|---|
| Protein accession | YP_002505020 |
|---|
| Protein GI | 220928111 |
|---|
| COG category | [K] Transcription
[L] Replication, recombination and repair |
|---|
| COG ID | [COG1199] Rad3-related DNA helicases |
|---|
| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGCAAAC CCGAGATAAA AATTTCAATC AGAAACCTTG TTGAACTGGT ACTGAGGTCT
GGTGATATTG ATAACAGGCT TGTTTCCTCG GGTAGAATGT TGGAAGGTAC AAAAATACAC
CAGAAGATAC AAAAGCAAGG TGGAGAATTA TATAACAAAG AGGTTTCTCT TGCCCATAAT
TACGAGACCC AGGATTTCAT ATTCAGACTT GAAGGCCGTG CAGACGGTAT TATATCAGAA
CCGGGCGGTG TTGTAATAGA TGAAATAAAA TCAACAGCAC GTCCCCTTGA ATTAATAGAT
GAAGAATTCA GTATTTTGCA TTGGGCACAA GCCAAGTGCT ATGCTTTTAT TTATGCACTC
CAGAATGAGC TTCAAAATAT ATATGTACAA TTGACGTATT TTCACATAGA TACGGAAGAA
ACTAAAAATA TCAGAAAACT GTTTTCAATT AAAGAACTGA ATGAGTTTAT TGAAGACTTA
TTGGATAAAT ATGTGGTATG GGCCAGTATT TCGGATTCAT GGAATAAACA AAGAGACGAT
TCCATAAAAA GCCTTCAGTT TCCGTTTAAG TCATACAGAA GGGGCCAGCG TGAGCTTGCA
GTTGCAGTAT ATAAAACTAT AATGCAAGGC AAAAAATTGT TTGCTCAGGC TCCTACAGGT
ATTGGAAAAA CCATATCAAC GCTTTTTCCT GCTGTTAAAG CCCTAGGTGA ACAACACATC
TCAAAAATAT TTTATCTAAC AGCAAAAACC ATTACAAGGC AGGTAGCTGA AGAAGCATTT
TCAAAAATGA GAGAGTGTGG TTTGGTATTC AGAACAATTA CTCTTACTGC AAAGGATAAA
ATATGCTTTA ATAAGGGCGG CAGCTGTAAT CCGGATTTCT GTGAATATGC AAAAGGCCAT
TACAACAGGG TGAACAACGC AATGGAAGAT GTGCTAAACA CTTCCCAAAA CCTGTCTCGG
GAAGTAATAG AAGAATATGC ACTCAAACAT AAGGTTTGTC CATTTGAATT CAGCCTTGAT
TTGTCATTGT GGGCGGATTG TATTGTTTGT GACTACAATT ATGCATTTGA CCCGAGAGTA
TATCTAAAAA GATTTTTTCT CAATAATACG GGGGATTATG CTTTTTTGGT TGATGAGGCT
CACAATTTGG TAGACAGAGC ACGGGAAATG TTTTCTGCTC AAATCCATAA GTCAGCATAT
CTTGAGGCAA AAAAGCTTAT GAAGTCAAAA GTCCCTAAGG TTGCCAAGAT ATTGAACAAA
ATAAATTCAT ATATGGTGAC TCTTCGCAAA CAATGTGCAG AAGAAGGCTT TATTATCAGC
AAAACAGAGC TTAAAGATCT TTACAGGCTG CTAAACAACT TTATATCCGA ATCAGAGGAA
TGGATATTAA AAAATCAAAA TAACAACATT GAGGGTTTTG AACAGCTTCT GGAGGTTTAT
TTCGACTCAA TAGCATTTAC CAGAATGGCT GATTTTTATG ATGAAAGATA CGTTACATTT
ATAGAGACGA AGTCAATGGA TGTCCGAGTA AAGCTTTTCT GTCTGGACCC CTCGTATTTG
CTTTCTGATG CGGTAAAGAG AGGGAAAACA GCTGTGTTTT TCTCTGCAAC GCTTACTCCT
GTTAATTATT TTATGGATAT ACTTGGCGGG GACAAAGAGG ATTACAACAT TAACCTTGCT
TCGCCATTTG ACAAGGACAA TCTTTGTCTT ATCGTTAATG ATAATATCTC TACAAGATAT
AAAAGCCGTG ATAAAAGTTA TGATAAAATA GTAGACATAA TATGGTCTTC TATAAGCAAA
AGGACAGGAA ATTATGTAGT GTTTTTTCCC TCATATAAAT ATATGAACGA GGTTTATACA
AGATTTACAG AGCAATATCC TGAAACGAAT ACAATAATAC AGGAAACTTC CATGACAGAA
GAAGAAAGGG AGAGCTTTCT AAACAGGTTT CAATCTGGTA CTGAAAAGAG CCTTGTTTCC
TTCGGTGTGT TGGGAGGAAT ATTTTCCGAG GGTATAGATT TAAAGGGAGA CCGGCTTATA
GGAGCTATAA TAGTAGGGGT AGGACTTCCT CAGGTTAGTC CTGAACAAAA TATAATCATG
GATTATTTTA AAAACAAAAA CCGTATGGGT TTTGAGAATG CATATATGTA TCCGGGTATG
AACAAAGTAT TACAGGCGGC AGGAAGGGTA ATCCGTTCAG AACACGATGT GGGAACAGTA
ATACTTCTTG ATGAAAGATT TTCAAATGGA AACTACAGGA GGCTATTTCC GAAACACTGG
GAACATGTCC TGCGTGTACA GGATACGGGA CAGTTGGAAA AAAGATTGGA GCAGTTCTGG
ATAGATAAAG ATATGGACAA GGTGAATACA TGA
|
|---|
| Protein sequence | MGKPEIKISI RNLVELVLRS GDIDNRLVSS GRMLEGTKIH QKIQKQGGEL YNKEVSLAHN
YETQDFIFRL EGRADGIISE PGGVVIDEIK STARPLELID EEFSILHWAQ AKCYAFIYAL
QNELQNIYVQ LTYFHIDTEE TKNIRKLFSI KELNEFIEDL LDKYVVWASI SDSWNKQRDD
SIKSLQFPFK SYRRGQRELA VAVYKTIMQG KKLFAQAPTG IGKTISTLFP AVKALGEQHI
SKIFYLTAKT ITRQVAEEAF SKMRECGLVF RTITLTAKDK ICFNKGGSCN PDFCEYAKGH
YNRVNNAMED VLNTSQNLSR EVIEEYALKH KVCPFEFSLD LSLWADCIVC DYNYAFDPRV
YLKRFFLNNT GDYAFLVDEA HNLVDRAREM FSAQIHKSAY LEAKKLMKSK VPKVAKILNK
INSYMVTLRK QCAEEGFIIS KTELKDLYRL LNNFISESEE WILKNQNNNI EGFEQLLEVY
FDSIAFTRMA DFYDERYVTF IETKSMDVRV KLFCLDPSYL LSDAVKRGKT AVFFSATLTP
VNYFMDILGG DKEDYNINLA SPFDKDNLCL IVNDNISTRY KSRDKSYDKI VDIIWSSISK
RTGNYVVFFP SYKYMNEVYT RFTEQYPETN TIIQETSMTE EERESFLNRF QSGTEKSLVS
FGVLGGIFSE GIDLKGDRLI GAIIVGVGLP QVSPEQNIIM DYFKNKNRMG FENAYMYPGM
NKVLQAAGRV IRSEHDVGTV ILLDERFSNG NYRRLFPKHW EHVLRVQDTG QLEKRLEQFW
IDKDMDKVNT
|
|---|
| |