Gene Ccel_0562 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCcel_0562 
Symbol 
ID7312120 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium cellulolyticum H10 
KingdomBacteria 
Replicon accessionNC_011898 
Strand
Start bp649040 
End bp650236 
Gene Length1197 bp 
Protein Length398 aa 
Translation table11 
GC content35% 
IMG OID643607498 
Producttransglutaminase domain protein 
Protein accessionYP_002504924 
Protein GI220928015 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1305] Transglutaminase-like enzymes, putative cysteine proteases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.567565 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGATAAATA TTCTTACAAA TCCAGTTAAC TTAATATTAA TACTACCTGT TTTGGTAACA 
CTTTTAAGCT CTTTGATAAC AAAATATAAC CGTGAAAGAG TTATAAAGAG TTTTTATTCA
ATAATAAATA ATATTGAACT AATCACAGGC CTACTAATTG CATTGTTTTT AACAAAGGGA
ATACTATTTG ACAATAATTA TAGGCTTTTT ATTTATATTC GTAATCATAT GCCCGAAACA
GTCAAAGCCA GCCTCGAAGC AAACAATATA TATACATACC TGTGTGTTGC GTTTATTGTA
CTATTGATTG TAGTACTGAT AATCAAAGCG GTCATGTATC CTCTGTACAA ACATGTATTT
GGAACCATGG CCCAAGGAAT ATACAAGGTT ATGAGCTCCA TGAGCTCTGT TACCAGAAGA
ATTATTGCAT TTGTTTGCAG TATACCAAAG GCAGCTGTTT CGCTAATTTG TATCAGTTTT
GTTCTATACT TTTTTTCATA TTATTTTACA GTACCCGGTT TATCAATGTG GATAGATGAT
TCAGCGGTAC TTCGAGGAGT TTATAAAACC GCTTTAAAAC CGGTGGTTGA GTCTGATATT
GCTAAGAAAA TACCGGTAAT TATTAATGAT CGCTTCGTTA GTCCCACAAT GAATGGGCAG
GAAGTAGAAA TAGCCGAAAA TATCAGAGAT ACTCTTGACA GCTACAATAT AAAGGTTATT
CAGTACTTTA ATGGTGTTAC TTTGGATGAT GCTGTTAAGT CCAATGATGA AATAGATAAG
CTAGCACTTG AATTGACTAA AGGAAAGACA GGTGATTATG AGAAAGCCAA AGCAATATAT
AAATGGATAA CTAAAAATAT AAAATATGAT TACCCAAAAG CAAAGCAGAT TGCTGTTAAG
ACGGAAGGTA CAAAATCCGG GTCAATAATC TGCTATGAAA CAAGGAAGGG GATTTGCTTC
GATTACTCAA GTCTCTTTAT TTCAATGTGC AGGGCAAATG GAATCAAGGT AAGGCTAGTT
ACAGGTTTGG GATACAGCGG GTTGGCCTGG GGAGATCATG CATGGAATCA GTTCTATGAT
AATGCTCAAA AAAAATGGGT AAATGTAGAC TGCACATTTG GAGTAAGTGG AAACTATTTT
GATTCTGCCA AATTTTCCTT GGATCACAAG GGCGATCGTG TACAAGAAGA ATGGTAA
 
Protein sequence
MINILTNPVN LILILPVLVT LLSSLITKYN RERVIKSFYS IINNIELITG LLIALFLTKG 
ILFDNNYRLF IYIRNHMPET VKASLEANNI YTYLCVAFIV LLIVVLIIKA VMYPLYKHVF
GTMAQGIYKV MSSMSSVTRR IIAFVCSIPK AAVSLICISF VLYFFSYYFT VPGLSMWIDD
SAVLRGVYKT ALKPVVESDI AKKIPVIIND RFVSPTMNGQ EVEIAENIRD TLDSYNIKVI
QYFNGVTLDD AVKSNDEIDK LALELTKGKT GDYEKAKAIY KWITKNIKYD YPKAKQIAVK
TEGTKSGSII CYETRKGICF DYSSLFISMC RANGIKVRLV TGLGYSGLAW GDHAWNQFYD
NAQKKWVNVD CTFGVSGNYF DSAKFSLDHK GDRVQEEW