Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ccel_0560 |
Symbol | |
ID | 7309430 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium cellulolyticum H10 |
Kingdom | Bacteria |
Replicon accession | NC_011898 |
Strand | + |
Start bp | 645589 |
End bp | 646614 |
Gene Length | 1026 bp |
Protein Length | 341 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 643607496 |
Product | histidine kinase |
Protein accession | YP_002504922 |
Protein GI | 220928013 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2205] Osmosensitive K+ channel histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0919197 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGAGA TAAAAAAAAG TGAAGTTGCT TTGATTGCAG TGATCTATGG TCTTTGTATA GGTTTTATGG TATATCAACT GATGGTTGCT AAAAATTTTC AAGCCGTCAT AATCAGTATT GTGTTTACAG CGGTAATAGC TGTCTTGATA GCAGTACTTA TATCAATGCT GCACAGATAT ATGCAAAGTG TAATGGTCCG GCTTTCCGAT ATGGTAGCGT CACTAATAGA CATGAGGGAA ACAGAAGTGT TTTCAGTCCT CAACGATGAT TTACTGTCAA AGTTACAATC ACAGGTGCTT AAGCTTTTAA GAATACTAAA GTCACAAAAT ACAAAGCTGC ATAATGAAAA AAATGAAATA AAATCTCTTA TTTCAGACAT ATCCCATCAG TTAAAAAACC CTCTTGCAAA TCTAAACATA TATGTATCCT TGATAAAGGA AGAAGATATT GCTCCGGCAA TGCGAAAGGA ATACCTTAAA AATATTGAAA ATCAATTGGA AAAGCTGAAT TGGTTGATGG AAAGCATGAT AAAGATGACC AGGCTTGAAA GCGGTATTAT CCGGCTGAAC CGTGAAATGA GCAGCTTGAA TGATGTACTC CTGACATCTT TAAAACAGAT ATACCAAAAA GCATTAAAAA AGAATATAGA TATAGTATTC ATTCCATCTG AAAAGGATAT TAAGATGTCT ATTGATATAA GATGGACGGC AGAGGCTATA ACCAATATTC TGGACAATTC TGTTAAGTAT ACACAGGAAT CGGGGAAAAT AAAAATACAG GTCCATAAAT ACGAGTTATT TGCCAGAATA GACATAGAGG ATAATGGTGC TGGGTTCGAT GAAAAGGAAG TAAATGATAT ATTCAAGCGT TTTTACCGAG GAAAAAACTC AAACTGGATA GACGGCGTCG GTATAGGACT CTATCTTACA AGAAGAATTA TTTCAATGCA GGACGGATAT ATAAAAGCAA AGTCCATTTT GGGCAAGGGA AGTACATTTT CAGTATTTCT CCCTCTTGAA AGCTGA
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Protein sequence | MKEIKKSEVA LIAVIYGLCI GFMVYQLMVA KNFQAVIISI VFTAVIAVLI AVLISMLHRY MQSVMVRLSD MVASLIDMRE TEVFSVLNDD LLSKLQSQVL KLLRILKSQN TKLHNEKNEI KSLISDISHQ LKNPLANLNI YVSLIKEEDI APAMRKEYLK NIENQLEKLN WLMESMIKMT RLESGIIRLN REMSSLNDVL LTSLKQIYQK ALKKNIDIVF IPSEKDIKMS IDIRWTAEAI TNILDNSVKY TQESGKIKIQ VHKYELFARI DIEDNGAGFD EKEVNDIFKR FYRGKNSNWI DGVGIGLYLT RRIISMQDGY IKAKSILGKG STFSVFLPLE S
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