Gene Ccel_0560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCcel_0560 
Symbol 
ID7309430 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium cellulolyticum H10 
KingdomBacteria 
Replicon accessionNC_011898 
Strand
Start bp645589 
End bp646614 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content35% 
IMG OID643607496 
Producthistidine kinase 
Protein accessionYP_002504922 
Protein GI220928013 
COG category[T] Signal transduction mechanisms 
COG ID[COG2205] Osmosensitive K+ channel histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0919197 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGAGA TAAAAAAAAG TGAAGTTGCT TTGATTGCAG TGATCTATGG TCTTTGTATA 
GGTTTTATGG TATATCAACT GATGGTTGCT AAAAATTTTC AAGCCGTCAT AATCAGTATT
GTGTTTACAG CGGTAATAGC TGTCTTGATA GCAGTACTTA TATCAATGCT GCACAGATAT
ATGCAAAGTG TAATGGTCCG GCTTTCCGAT ATGGTAGCGT CACTAATAGA CATGAGGGAA
ACAGAAGTGT TTTCAGTCCT CAACGATGAT TTACTGTCAA AGTTACAATC ACAGGTGCTT
AAGCTTTTAA GAATACTAAA GTCACAAAAT ACAAAGCTGC ATAATGAAAA AAATGAAATA
AAATCTCTTA TTTCAGACAT ATCCCATCAG TTAAAAAACC CTCTTGCAAA TCTAAACATA
TATGTATCCT TGATAAAGGA AGAAGATATT GCTCCGGCAA TGCGAAAGGA ATACCTTAAA
AATATTGAAA ATCAATTGGA AAAGCTGAAT TGGTTGATGG AAAGCATGAT AAAGATGACC
AGGCTTGAAA GCGGTATTAT CCGGCTGAAC CGTGAAATGA GCAGCTTGAA TGATGTACTC
CTGACATCTT TAAAACAGAT ATACCAAAAA GCATTAAAAA AGAATATAGA TATAGTATTC
ATTCCATCTG AAAAGGATAT TAAGATGTCT ATTGATATAA GATGGACGGC AGAGGCTATA
ACCAATATTC TGGACAATTC TGTTAAGTAT ACACAGGAAT CGGGGAAAAT AAAAATACAG
GTCCATAAAT ACGAGTTATT TGCCAGAATA GACATAGAGG ATAATGGTGC TGGGTTCGAT
GAAAAGGAAG TAAATGATAT ATTCAAGCGT TTTTACCGAG GAAAAAACTC AAACTGGATA
GACGGCGTCG GTATAGGACT CTATCTTACA AGAAGAATTA TTTCAATGCA GGACGGATAT
ATAAAAGCAA AGTCCATTTT GGGCAAGGGA AGTACATTTT CAGTATTTCT CCCTCTTGAA
AGCTGA
 
Protein sequence
MKEIKKSEVA LIAVIYGLCI GFMVYQLMVA KNFQAVIISI VFTAVIAVLI AVLISMLHRY 
MQSVMVRLSD MVASLIDMRE TEVFSVLNDD LLSKLQSQVL KLLRILKSQN TKLHNEKNEI
KSLISDISHQ LKNPLANLNI YVSLIKEEDI APAMRKEYLK NIENQLEKLN WLMESMIKMT
RLESGIIRLN REMSSLNDVL LTSLKQIYQK ALKKNIDIVF IPSEKDIKMS IDIRWTAEAI
TNILDNSVKY TQESGKIKIQ VHKYELFARI DIEDNGAGFD EKEVNDIFKR FYRGKNSNWI
DGVGIGLYLT RRIISMQDGY IKAKSILGKG STFSVFLPLE S