| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccel_0525 |
|---|
| Symbol | |
|---|
| ID | 7309399 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium cellulolyticum H10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011898 |
|---|
| Strand | - |
|---|
| Start bp | 611421 |
|---|
| End bp | 612185 |
|---|
| Gene Length | 765 bp |
|---|
| Protein Length | 254 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 643607459 |
|---|
| Product | dihydrodipicolinate reductase |
|---|
| Protein accession | YP_002504887 |
|---|
| Protein GI | 220927978 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0289] Dihydrodipicolinate reductase |
|---|
| TIGRFAM ID | [TIGR00036] dihydrodipicolinate reductase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.000702281 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTAAGA TATTATTAAG CGGTTGCAAC GGAAAAATGG GTCAGGTTAT TACCAGACTT
TCAGATAATT TTAGTGAATT AAAGATAACG GCAGGGTTTG ATATTAATAA CAATATTAAT
AACCCATACC CCGTTTTTAC TTCGCTGGCG GACTGTAATG CAGATGTTGA TGTTATAATA
GATTTTTCAA ACCCGAAAGC ATTTAAACCA TTGGTGGAAT ATGCACAGGA AAAGCATATA
CCTCTGGTAC TTGCTACAAC AGGTTTGTCA TCAGAGCAGA TAACAATACT TAAAACTTCA
GTTTCAAACA GAATACCGGT TTTCTTCTCA GCAAATATGT CACTTGGAGT CAATTTACTT
ATTGATCTGG TGAAAAAAGC CGCCAAGGTT CTGGAAGATC AATTTGATAT AGAAATAGTT
GAAAAACATC ATAATCAAAA AATCGATGCA CCAAGTGGAA CAGCTCTTGC CATTGCTGAC
GCTATTAATG ATTCACTTGA CGAAAAATAT GAATATATGT ATGACAGACA TTCCAGAAGA
AAGAAACGCA GTAAACAGGA AATTGGTATA CATGCCGTAC GCGGAGGTAC AATTGTAGGT
GACCACTCTG TTATTTTTGC AGGAAACGAT GAAATAATAG AGATTAATCA CACTGCATTA
TCAAAAGAGA TATTTGCCGT AGGTGCATTA AAGGCTTCAA TCTTTCTTGC ATCAAAAAAA
CCTGGCTTGT ATTCAATGTC GGAACTTATT TCTGAAACCA ATTAG
|
|---|
| Protein sequence | MIKILLSGCN GKMGQVITRL SDNFSELKIT AGFDINNNIN NPYPVFTSLA DCNADVDVII
DFSNPKAFKP LVEYAQEKHI PLVLATTGLS SEQITILKTS VSNRIPVFFS ANMSLGVNLL
IDLVKKAAKV LEDQFDIEIV EKHHNQKIDA PSGTALAIAD AINDSLDEKY EYMYDRHSRR
KKRSKQEIGI HAVRGGTIVG DHSVIFAGND EIIEINHTAL SKEIFAVGAL KASIFLASKK
PGLYSMSELI SETN
|
|---|
| |