Gene Ccel_0390 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCcel_0390 
Symbol 
ID7309271 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium cellulolyticum H10 
KingdomBacteria 
Replicon accessionNC_011898 
Strand
Start bp441946 
End bp443367 
Gene Length1422 bp 
Protein Length473 aa 
Translation table11 
GC content33% 
IMG OID643607318 
Producthypothetical protein 
Protein accessionYP_002504755 
Protein GI220927846 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAAAATA ATTTATTAAG CATCGATGAA TACCGGAATA ACCCGGAATT TTATTTCTAT 
AAGGGACTGC GTTGTGCCAA CAAAAGGAAT TTAAACGAAG CCTACAAACA TCTGGTTAGG
GCTTCTGAGC TAAGTCCTGA GAATATGGAG TATAAATTTA ACATAGCATG CTTTCTTTCT
GAAATGCAAA GGCCCAGAGA AGCCAATAGA ATATTCAAGG ATATACTATT ACACTATGAT
CCAACAATGT ATGATTGCTA TTTTGGTATG GGTTGTAACA GCTTTGAGCT TGGTGACATG
AAAAAAGCAG CTGAATACTT TGAAAAGTAC ATCTATTTTG ACAGTGATGG GGAATTCAGC
GAAGAAGTTT CAGAAATGAT ATTTTATTTA AAACTGTATA ATGACATTTC CGGAGACAAC
AGATTTTTGA GGCTGTCTCA GATCAATTTT AAAAAGGCTG AAAAAAGCCT TTTAAATAAC
AAAACTGACC ATGCGGTAAG CGAGCTTTAT AGAGCAATAG CATTTAACCC CTTGAATACA
GAGGCCCGTA ATCTGCTGGT ACTAATAATG CTGGAGCAGC AGAACTACAA ACGTGCAGCA
AGTTTTGTCT CTACTGTATT AAATATATAT AGTGAAGACA TATGGGCAAA TACTCTAAAA
ATATACAACT TATACTGCAC TCGGAAATAT TCCCGGGTGG AAAAACTTTT AAAGATCCTT
CCTTTCAGAA GAGTACATAA CAGGAAGGAC CTTTTATGTA TTGTAACTAC ATTAATAGTT
TTTAATAAAA TTGATGAAAT GATTCTCCTG TTGGAAACAT ACATTGTTGA GTACAATGAT
TTGATCATAT ATTTGACACT GCTTTTAGGG TATGTATCCG TAAAGAATTA TAGTAAGGCA
AACCAGATGA TTAAAAACCT TCTATCATTC AAAACATTGA ATAAAGATAT TTCTGATTGG
CTTAAAAAAA TCAGCCGAAT TATGAAGGAA AATACTGTGG AAATATCTGT TTTGGATGAA
TACAAGGAAA TATTTGGAAT AATCGGAGAA ACTGAAGATT ACATGTATAG TCCGACAGGG
TATTCGAAAA TATTGGAAAA TGCCTTCGTG CCGAGACAAA GAGCTTCAAG GAGGATTCCT
GCAAAGTACA ATTCTGTAGT TAAATGTACA GTTCTTAATA AGGAAATAAT GTATGTTCCT
GATTATGAAA AGGAAATAAT ACATTTGTTG TGCAATATAA TCAAAGGTAC AGAAGAACTT
TTGCCGGAGA ATGAAAAGGA TATAACTGCC CTTTCTGCTG TAGTTGAATA TATCTATTGT
AAGGAGAACT TTATAGAAAT GGGTAAGGAG GAATTAATAC AAAAGTATGG TATTACCTCT
ATTTCCTTTA ACAGGGTGCT AAAAAAAATT AAGTATAAGT AA
 
Protein sequence
MKNNLLSIDE YRNNPEFYFY KGLRCANKRN LNEAYKHLVR ASELSPENME YKFNIACFLS 
EMQRPREANR IFKDILLHYD PTMYDCYFGM GCNSFELGDM KKAAEYFEKY IYFDSDGEFS
EEVSEMIFYL KLYNDISGDN RFLRLSQINF KKAEKSLLNN KTDHAVSELY RAIAFNPLNT
EARNLLVLIM LEQQNYKRAA SFVSTVLNIY SEDIWANTLK IYNLYCTRKY SRVEKLLKIL
PFRRVHNRKD LLCIVTTLIV FNKIDEMILL LETYIVEYND LIIYLTLLLG YVSVKNYSKA
NQMIKNLLSF KTLNKDISDW LKKISRIMKE NTVEISVLDE YKEIFGIIGE TEDYMYSPTG
YSKILENAFV PRQRASRRIP AKYNSVVKCT VLNKEIMYVP DYEKEIIHLL CNIIKGTEEL
LPENEKDITA LSAVVEYIYC KENFIEMGKE ELIQKYGITS ISFNRVLKKI KYK