Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ccel_0354 |
Symbol | |
ID | 7312092 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium cellulolyticum H10 |
Kingdom | Bacteria |
Replicon accession | NC_011898 |
Strand | + |
Start bp | 407009 |
End bp | 409165 |
Gene Length | 2157 bp |
Protein Length | 718 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 643607282 |
Product | RNA binding S1 domain protein |
Protein accession | YP_002504719 |
Protein GI | 220927810 |
COG category | [K] Transcription |
COG ID | [COG2183] Transcriptional accessory protein |
TIGRFAM ID | [TIGR00426] competence protein ComEA helix-hairpin-helix repeat region |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAGACA TAGTCGGGCA GTTAATCAGG GAATTCAACT TGAAGCCTTT TCAGGTGCAA AATACAGTTA AACTTATAGA TGAAGGAAAT ACAATACCAT TTATAGCTCG TTATAGAAAA GAAGTTACGG GAGAACTTAA CGACCAGGTT TTAAGAGAGC TTAACGAGCG CTTAGTGTAT TTAAGAAATC TGGATGAACG GCGGGAAGAT GTAAGAAGGC TTATAGAGGA GCAGGGCAAA CTTACGGAAG AAATAGTGAA ATCTCTAGAT TCAGCCATGA CACTACAGGA AATAGAGGAT ATTTACAGAC CTTACAAGTT AAAAAGGAAA ACACGGGCAT CTGTTGCCAG GGAAAAAGGT CTTGAACCCC TTGCTACCAT TATATATTCA CAGCTTCCAA CAAAAACTTC TATAAATGAA ATTGCTTCAA GGTATATTAA CGAGGAAAAA GGAATAAACA GTGTGGATGA AGCTATTAAA GGAGCTTTAG ATATAATAGC CGAGGAAGTT TCCGATAATG CTGAATTCAG AAAGGTTTTA AGAGAAATAA TATTTAAAAA TGGCCTTGTA ATGTCTTTCG GTAAAAAGGA TGAGGACTCT GTATACAGAA TGTACTATGA TTTTAAGGAA CCCGTATCAA AGATAGCAAG ACATCGAGTT CTTGCCTTAA ACAGGGGGGA GAAGGAAGAT TTCCTGAGTG TAAAAATAGA TTTAAACGAG GACTTGTGTC TGAATTTTTT AAAGTCTAAC ACTCTTAAAA ACACAAATAC TGAAATGTCT AAATATGTTG AATCCGCTGT TGAGGATTCT TTTAAAAGAC TGATTTTTCC GTCTTTGGAG AGGGATATAC GCAATCAGCT TACGGAGTTA GCTGAGGATC AGGCTATAAA GGTATTTTCC GAGAATCTGA GGAACCTTCT GCTTCAGCCG CCTGTCAAGG ACAGGGTGGT ACTTGGTCTT GACCCGGCAT ACAGGACAGG TTGTAAGCTG GCAGTAGTGG ATGGAACGGG TAAAGTGCTG GAGACTACCG TTATCTATCC GACTCCGCCT CAGAACAAAA TAGATGAGGC AAAAAAGAAA GTAAAAGAAC TTATTAAAAA GTACGAAGTT GACATAATTT CAATTGGAAA CGGTACAGCC TCCAAGGAAT CTGAGATATT TGTAGCTGAT TTGCTGAAGG AAATAGACAG AGAGGTTTAC TATATGGTGG TAAGCGAGGC GGGTGCATCG GTATATTCGG CCTCGAAGCT TGGTGCGGAA GAATTTCCGG ATTTTGACGT TGCTCTCCGA AGTGCTGTTT CCATTGCAAG AAGGCTTCAA GACCCTCTGG CAGAGCTGGT AAAGATCGAC CCTAAAGCAA TCGGGGTTGG ACAATACCAG CATGATATGA ACCAGAAAAG ACTTGATGAG TCTCTTGGCG GAGTGGTAGA GGATTGTGTA AACAATGTGG GTGTTGATTT GAATACAGCT TCTGCACCTT TACTTTCTTA TGTTTCAGGG ATAAGCACTG CAATTGCAAA GAATGTTGTT GAGTACAGAG AGGAAAACGG AAAATTTAAG GCAAGAAATG AACTAAAAAA GGTAAAGAAG CTTGGAAACA AGACATTTGA ACAATGTGCA GGCTTTTTAA GAATAACAGA TGGTGAAAAC ATTCTTGATA ATACGTCCGT TCATCCCGAA TCATATAAAG CAGCAAAGCT CCTTTTGGAG AAGATGGGCT ATTCTTTGGA AGATGTGAGA GCAAAAAAAC TTTCAGGACT TGACAATAAG GTTCAGCAGG CAGGAATGTC TCGTATAGCA GAGGAACTAG GTATTGGTGT ACCGACCTTA AAGGATATAA TAAATGAACT GCTAAAGCCG GGAAGAGACC CCAGGGACGA ATTGCCAAAA CCAATGCTTC ACTCGGATGT ACTTCATATG GAGGACCTGA AACAGGGAAT GATACTCACT GGAACGGTAA GAAACGTAGC TGATTTCGGT GCTTTTGTTG ATATAGGAGT TCATCAGGAC GGACTTGTGC ATATATCTCA GCTGGCTGAC AAATATGTTA AAAATCCCAT GGATGTAGTT GCTGTGGGGG ATATAGTAAA AGTCAAGATT CTTGAAGTGG ATGTTGAAAG AAAGAGAATA TCCCTTACTA TGAAAGAAAT AAACTAA
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Protein sequence | MTDIVGQLIR EFNLKPFQVQ NTVKLIDEGN TIPFIARYRK EVTGELNDQV LRELNERLVY LRNLDERRED VRRLIEEQGK LTEEIVKSLD SAMTLQEIED IYRPYKLKRK TRASVAREKG LEPLATIIYS QLPTKTSINE IASRYINEEK GINSVDEAIK GALDIIAEEV SDNAEFRKVL REIIFKNGLV MSFGKKDEDS VYRMYYDFKE PVSKIARHRV LALNRGEKED FLSVKIDLNE DLCLNFLKSN TLKNTNTEMS KYVESAVEDS FKRLIFPSLE RDIRNQLTEL AEDQAIKVFS ENLRNLLLQP PVKDRVVLGL DPAYRTGCKL AVVDGTGKVL ETTVIYPTPP QNKIDEAKKK VKELIKKYEV DIISIGNGTA SKESEIFVAD LLKEIDREVY YMVVSEAGAS VYSASKLGAE EFPDFDVALR SAVSIARRLQ DPLAELVKID PKAIGVGQYQ HDMNQKRLDE SLGGVVEDCV NNVGVDLNTA SAPLLSYVSG ISTAIAKNVV EYREENGKFK ARNELKKVKK LGNKTFEQCA GFLRITDGEN ILDNTSVHPE SYKAAKLLLE KMGYSLEDVR AKKLSGLDNK VQQAGMSRIA EELGIGVPTL KDIINELLKP GRDPRDELPK PMLHSDVLHM EDLKQGMILT GTVRNVADFG AFVDIGVHQD GLVHISQLAD KYVKNPMDVV AVGDIVKVKI LEVDVERKRI SLTMKEIN
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