| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccel_0354 |
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| Symbol | |
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| ID | 7312092 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium cellulolyticum H10 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011898 |
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| Strand | + |
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| Start bp | 407009 |
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| End bp | 409165 |
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| Gene Length | 2157 bp |
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| Protein Length | 718 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 643607282 |
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| Product | RNA binding S1 domain protein |
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| Protein accession | YP_002504719 |
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| Protein GI | 220927810 |
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| COG category | [K] Transcription |
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| COG ID | [COG2183] Transcriptional accessory protein |
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| TIGRFAM ID | [TIGR00426] competence protein ComEA helix-hairpin-helix repeat region |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAGACA TAGTCGGGCA GTTAATCAGG GAATTCAACT TGAAGCCTTT TCAGGTGCAA
AATACAGTTA AACTTATAGA TGAAGGAAAT ACAATACCAT TTATAGCTCG TTATAGAAAA
GAAGTTACGG GAGAACTTAA CGACCAGGTT TTAAGAGAGC TTAACGAGCG CTTAGTGTAT
TTAAGAAATC TGGATGAACG GCGGGAAGAT GTAAGAAGGC TTATAGAGGA GCAGGGCAAA
CTTACGGAAG AAATAGTGAA ATCTCTAGAT TCAGCCATGA CACTACAGGA AATAGAGGAT
ATTTACAGAC CTTACAAGTT AAAAAGGAAA ACACGGGCAT CTGTTGCCAG GGAAAAAGGT
CTTGAACCCC TTGCTACCAT TATATATTCA CAGCTTCCAA CAAAAACTTC TATAAATGAA
ATTGCTTCAA GGTATATTAA CGAGGAAAAA GGAATAAACA GTGTGGATGA AGCTATTAAA
GGAGCTTTAG ATATAATAGC CGAGGAAGTT TCCGATAATG CTGAATTCAG AAAGGTTTTA
AGAGAAATAA TATTTAAAAA TGGCCTTGTA ATGTCTTTCG GTAAAAAGGA TGAGGACTCT
GTATACAGAA TGTACTATGA TTTTAAGGAA CCCGTATCAA AGATAGCAAG ACATCGAGTT
CTTGCCTTAA ACAGGGGGGA GAAGGAAGAT TTCCTGAGTG TAAAAATAGA TTTAAACGAG
GACTTGTGTC TGAATTTTTT AAAGTCTAAC ACTCTTAAAA ACACAAATAC TGAAATGTCT
AAATATGTTG AATCCGCTGT TGAGGATTCT TTTAAAAGAC TGATTTTTCC GTCTTTGGAG
AGGGATATAC GCAATCAGCT TACGGAGTTA GCTGAGGATC AGGCTATAAA GGTATTTTCC
GAGAATCTGA GGAACCTTCT GCTTCAGCCG CCTGTCAAGG ACAGGGTGGT ACTTGGTCTT
GACCCGGCAT ACAGGACAGG TTGTAAGCTG GCAGTAGTGG ATGGAACGGG TAAAGTGCTG
GAGACTACCG TTATCTATCC GACTCCGCCT CAGAACAAAA TAGATGAGGC AAAAAAGAAA
GTAAAAGAAC TTATTAAAAA GTACGAAGTT GACATAATTT CAATTGGAAA CGGTACAGCC
TCCAAGGAAT CTGAGATATT TGTAGCTGAT TTGCTGAAGG AAATAGACAG AGAGGTTTAC
TATATGGTGG TAAGCGAGGC GGGTGCATCG GTATATTCGG CCTCGAAGCT TGGTGCGGAA
GAATTTCCGG ATTTTGACGT TGCTCTCCGA AGTGCTGTTT CCATTGCAAG AAGGCTTCAA
GACCCTCTGG CAGAGCTGGT AAAGATCGAC CCTAAAGCAA TCGGGGTTGG ACAATACCAG
CATGATATGA ACCAGAAAAG ACTTGATGAG TCTCTTGGCG GAGTGGTAGA GGATTGTGTA
AACAATGTGG GTGTTGATTT GAATACAGCT TCTGCACCTT TACTTTCTTA TGTTTCAGGG
ATAAGCACTG CAATTGCAAA GAATGTTGTT GAGTACAGAG AGGAAAACGG AAAATTTAAG
GCAAGAAATG AACTAAAAAA GGTAAAGAAG CTTGGAAACA AGACATTTGA ACAATGTGCA
GGCTTTTTAA GAATAACAGA TGGTGAAAAC ATTCTTGATA ATACGTCCGT TCATCCCGAA
TCATATAAAG CAGCAAAGCT CCTTTTGGAG AAGATGGGCT ATTCTTTGGA AGATGTGAGA
GCAAAAAAAC TTTCAGGACT TGACAATAAG GTTCAGCAGG CAGGAATGTC TCGTATAGCA
GAGGAACTAG GTATTGGTGT ACCGACCTTA AAGGATATAA TAAATGAACT GCTAAAGCCG
GGAAGAGACC CCAGGGACGA ATTGCCAAAA CCAATGCTTC ACTCGGATGT ACTTCATATG
GAGGACCTGA AACAGGGAAT GATACTCACT GGAACGGTAA GAAACGTAGC TGATTTCGGT
GCTTTTGTTG ATATAGGAGT TCATCAGGAC GGACTTGTGC ATATATCTCA GCTGGCTGAC
AAATATGTTA AAAATCCCAT GGATGTAGTT GCTGTGGGGG ATATAGTAAA AGTCAAGATT
CTTGAAGTGG ATGTTGAAAG AAAGAGAATA TCCCTTACTA TGAAAGAAAT AAACTAA
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| Protein sequence | MTDIVGQLIR EFNLKPFQVQ NTVKLIDEGN TIPFIARYRK EVTGELNDQV LRELNERLVY
LRNLDERRED VRRLIEEQGK LTEEIVKSLD SAMTLQEIED IYRPYKLKRK TRASVAREKG
LEPLATIIYS QLPTKTSINE IASRYINEEK GINSVDEAIK GALDIIAEEV SDNAEFRKVL
REIIFKNGLV MSFGKKDEDS VYRMYYDFKE PVSKIARHRV LALNRGEKED FLSVKIDLNE
DLCLNFLKSN TLKNTNTEMS KYVESAVEDS FKRLIFPSLE RDIRNQLTEL AEDQAIKVFS
ENLRNLLLQP PVKDRVVLGL DPAYRTGCKL AVVDGTGKVL ETTVIYPTPP QNKIDEAKKK
VKELIKKYEV DIISIGNGTA SKESEIFVAD LLKEIDREVY YMVVSEAGAS VYSASKLGAE
EFPDFDVALR SAVSIARRLQ DPLAELVKID PKAIGVGQYQ HDMNQKRLDE SLGGVVEDCV
NNVGVDLNTA SAPLLSYVSG ISTAIAKNVV EYREENGKFK ARNELKKVKK LGNKTFEQCA
GFLRITDGEN ILDNTSVHPE SYKAAKLLLE KMGYSLEDVR AKKLSGLDNK VQQAGMSRIA
EELGIGVPTL KDIINELLKP GRDPRDELPK PMLHSDVLHM EDLKQGMILT GTVRNVADFG
AFVDIGVHQD GLVHISQLAD KYVKNPMDVV AVGDIVKVKI LEVDVERKRI SLTMKEIN
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