| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccel_0320 |
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| Symbol | |
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| ID | 7309210 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium cellulolyticum H10 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011898 |
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| Strand | + |
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| Start bp | 371303 |
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| End bp | 371848 |
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| Gene Length | 546 bp |
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| Protein Length | 181 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 643607250 |
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| Product | YdaE |
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| Protein accession | YP_002504687 |
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| Protein GI | 220927778 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3822] ABC-type sugar transport system, auxiliary component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0343325 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATAAATA AGGAAGAACA TTTGAGGGCT TTAGAGGATA CACTAGCCTA TTTTAACAAA
GCATCTATAG TTTTGACTGA ATATGAAAAG AAACAAATAG AAATAGCTGA TTTTGGTCTT
AATGACTTGA GGCATACAGG CCTTCAACTA ATAACCTTTG TTAATACCGA TAGAGTGTGT
GCCAAGGAAA TGGTTCTTTT CCCACGCCAG ACATGTCCTG AGCACAAGCA CCCCAACAGG
AATGGTATCC CCGGAAAAGA GGAAACTTTC AGATGCAGAA GCGGGAGGGT TTACCTTTAT
GTAGAAGGTG AAAAGTCTCA AGAAATTCAT TGTAAAGTGC CGCCAGGCAG TGAAAAGTAC
TATACGGTTT GGCATGAAAT AATCCTGAAT CCGGGAGAAC AATACACACT ATATCCTGAC
ACTCTTCACT GGTTCCAGGC TGGAGAAGAA GGAGCAGTCA TATCTGAGTT TTCAACTAAT
TCAGATGACC TCTCCGATAT TTTTACAGAT GATAGGATAA AAAGAATACC TGAAATAGAT
AGATAG
|
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| Protein sequence | MINKEEHLRA LEDTLAYFNK ASIVLTEYEK KQIEIADFGL NDLRHTGLQL ITFVNTDRVC
AKEMVLFPRQ TCPEHKHPNR NGIPGKEETF RCRSGRVYLY VEGEKSQEIH CKVPPGSEKY
YTVWHEIILN PGEQYTLYPD TLHWFQAGEE GAVISEFSTN SDDLSDIFTD DRIKRIPEID
R
|
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