| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccel_0295 |
|---|
| Symbol | |
|---|
| ID | 7309189 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium cellulolyticum H10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011898 |
|---|
| Strand | + |
|---|
| Start bp | 340452 |
|---|
| End bp | 341399 |
|---|
| Gene Length | 948 bp |
|---|
| Protein Length | 315 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 643607225 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_002504662 |
|---|
| Protein GI | 220927753 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTGAAA TTCAGAATTT GACCAAAAGT TATGGTCAGA TAAAGGCTGT AGACGATATA
AGTTTTACAG TTGAGAAAGG TGAAGTACTT GGTTTCCTAG GACCTAACGG TGCCGGAAAA
TCAACTACCA TGAATATCAT TACAGGGTTT ATACCTTCAA CAGAGGGAAC TGTAAAAGTT
AACGGTTTTG ATATTATGGA AAGTCCAGCG GAAGTAAAAA GAAGAATAGG TTATTTGCCT
GAACTGCCGC CATTGTATAT GGATATGACA GTATCAGAGT ATCTGGGCTT TGCAGCTGAT
TTAAAAAATG TAAGTAAAAA GCAGAAGAAA AGCCAGATGG CTGATATCAT GGAATTAGTC
AAATTGACAG ATGTCAGAGG CCGGCTGGTA AAAAATCTTT CAAAAGGATA CAAGCAAAGA
GTTGGCTTAG CTCAGGCACT TATGGGTAAT CCCGAAGTAC TGATTCTTGA TGAACCTACA
GTTGGCCTTG ACCCAAAGCA GATAATAGAA ATCAGAAAGC TGATAAAGGC TCTTGGAAAG
CAGCATACCA TAATATTAAG CTCACATATT CTGCCTGAAG TTAGTGCTGT TTGTGAAAGA
GTTGTTATTA TCAACAAGGG TAAAATAGCA GCAGTGGATA CCCCTGAAAA CCTTTCAAAA
GGAATGGGTA CTGTTAGTAA GCTTTCTGCT ACAATCGTCG GACCTAAGAG TTCAATCATT
GGATTTATTC AGGGAATTTA CGGGATAAAA TATGTAGAAC CCCATGTAGA AAAGGATACG
GATGTTGTGG AATACATCAT CGAGTCCGAC AAGGAAATTG ACGTAAGACG TCCTCTTTTC
TTTGCTATGG CAAAAGCAGG ATACCCCATC ATAGAGTTAA AATCTCTGGA TCTTACTCTC
GAAGATATAT TCCTGCAGAT TACCACACAG GAAAAGGAGG TTATATAA
|
|---|
| Protein sequence | MIEIQNLTKS YGQIKAVDDI SFTVEKGEVL GFLGPNGAGK STTMNIITGF IPSTEGTVKV
NGFDIMESPA EVKRRIGYLP ELPPLYMDMT VSEYLGFAAD LKNVSKKQKK SQMADIMELV
KLTDVRGRLV KNLSKGYKQR VGLAQALMGN PEVLILDEPT VGLDPKQIIE IRKLIKALGK
QHTIILSSHI LPEVSAVCER VVIINKGKIA AVDTPENLSK GMGTVSKLSA TIVGPKSSII
GFIQGIYGIK YVEPHVEKDT DVVEYIIESD KEIDVRRPLF FAMAKAGYPI IELKSLDLTL
EDIFLQITTQ EKEVI
|
|---|
| |