Gene Ccel_0260 details

Gene Information

• Locus tag: Ccel_0260
• Symbol: upp
• ID: 7309160
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium cellulolyticum H10
• Kingdom: Bacteria
• Replicon accession: NC_011898
• Strand: +
• Start bp: 289334
• End bp: 289963
• Gene Length: 630 bp
• Protein Length: 209 aa
• Translation table: 11
• GC content: 39%
• IMG OID: 643607190
• Product: uracil phosphoribosyltransferase
• Protein accession: YP_002504627
• Protein GI: 220927718
• COG category: [F] Nucleotide transport and metabolism
• COG ID: [COG0035] Uracil phosphoribosyltransferase
• TIGRFAM ID: [TIGR01091] uracil phosphoribosyltransferase

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.000384888
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAGAATG TATTTGTTTT TGACCATCCA CTTATACAAC ATAAGATATC ACTGCTTAGA 
GACAAGAACA CAAATACAAA GGAATTCAGA GAACTAGTTT CAGAGATAGC AATGCTTATG 
GGTTATGAAG TAACCCGGAA TATGCCGTTA AAAGAAGTGG AAATTGAAAC TCCTATAGGA 
ATGGCTAAGA CCAAGGTTAT TTCAGGAAAG AAACTTGGAA TAGTTCCTAT ATTGAGAGCT 
GGTCTAGGAA TGGTTGATGG TATGTTGAGA CTTATCCCAA TGGCAAAAGT AGGGCATATC 
GGTTTATACA GGGATCCCGA ATCATTACAG CCTGTTGAAT ACTACTGCAA GCTTCCTGTT 
GATGTTGAAG AGAGAGAGAT AGTTGTTCTT GATCCGATGC TTGCTACGGG TGGTTCTGCT 
TCAGCAGCTA TTCAGTTTAT TAAAAACAGA GGCGTAAAGA ATATAAAGCT TATGTGCCTT 
ATTGCTGCAA AAGCAGGAAT TGAAAGAATG CAGAAGGATC ATCCTGATGT TGGAATTTAC 
TGTGCATCAG TCGATGAAAT TCTTAACGAT CATGCATATA TTGTACCGGG ACTTGGCGAT 
GCAGGTGACA GATTATTTGG GACCAAGTAA 

 

Protein sequence

MENVFVFDHP LIQHKISLLR DKNTNTKEFR ELVSEIAMLM GYEVTRNMPL KEVEIETPIG 
MAKTKVISGK KLGIVPILRA GLGMVDGMLR LIPMAKVGHI GLYRDPESLQ PVEYYCKLPV 
DVEEREIVVL DPMLATGGSA SAAIQFIKNR GVKNIKLMCL IAAKAGIERM QKDHPDVGIY 
CASVDEILND HAYIVPGLGD AGDRLFGTK