Gene Ccel_0128 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCcel_0128 
Symbol 
ID7312063 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium cellulolyticum H10 
KingdomBacteria 
Replicon accessionNC_011898 
Strand+ 
Start bp142711 
End bp143781 
Gene Length1071 bp 
Protein Length356 aa 
Translation table11 
GC content44% 
IMG OID643607057 
Product3-isopropylmalate dehydrogenase 
Protein accessionYP_002504496 
Protein GI220927587 
COG category[C] Energy production and conversion
[E] Amino acid transport and metabolism 
COG ID[COG0473] Isocitrate/isopropylmalate dehydrogenase 
TIGRFAM ID[TIGR00169] 3-isopropylmalate dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATTATA AAATAACAGT ACTTCCGGGG GACGGAATAG GCCCGGACAT AGTGGCAGAG 
GCATTGAAGG TTTTAGAACT CACAGGTAAA AAATGTGGCC ACACATTCTT ATTTACAGAG 
GCCGATTTGG GCGGTATAGC TATAGACCGA CATGGAGAGC CTCTACCTCA ATCCACAGTG 
GATATTTGCA AAGGCAGTGA TGCAGTTCTC CTTGGTGCAG TAGGAGGCCC CAAATGGGAT 
ACCTTGCCGG GAAACAAAAG ACCTGAAGCA GGATTGCTTG GTATAAGGTC TGCTCTGGGA 
TTATATGCAA ACCTGAGACC GGCTGTAATA TACAGTGCTT TAAAGGATGC ATCACCTTTA 
AAGTCTGAAA TAATAAGTAA CGGTATTGAC ATTATGGTTA TCCGCGAATT GACAGGCGGA 
ATGTATTTCG GAAAGAGAGG CAGACTTGAG ACGGATGGCG GAGAGGCTGC GTTCGATACT 
GAAATGTATA ATGTATCCGA GGTAAAAAGA ATAGCAAAAG TAGGCTTTGA AACGGCTATG 
AAGAGGAGCA AAAAGCTTAT GTCCGTAGAT AAGGCCAATG TACTTGAAAG CTCAAGGCTA 
TGGAGACAGG TGGTTGTAGA AGTGGCAAAG GAATACCCTG AGGTTACCCT TAGCCATATG 
TATGTAGACA ATGCTGCAAT GCAGCTTGTA AGGAATCCTG CTCAATTTGA TGTTATTCTT 
ACAAGTAATA TATTCGGAGA TATTTTGTCC GATGAGGCTT CTATGATAAC AGGATCAATA 
GGGATGTTGC CGTCTGCAAG CCTTGGTGCT ACAAAACTGG GGCTTTTTGA ACCGATACAT 
GGGTCCGCCC CGGATATAGC GGGGCAGGAT AAGGCAAATC CTATTGCAAC AATTCTTTCC 
GTGGCCATGA TGTTAAGATA TTCACTTGGC CTGACAGAGG AAGCAGACTC CATTGAAAAA 
GCGGTTACTG ATGTGTTGAA TAAAGGCTAC AGAACTGCAG ACATAGCATC TTCGGGTACT 
AAGGTTGTTG GCACTAAGGA GATGGGAAAG CTCATAAGGG AGCATATGTA G
 
Protein sequence
MNYKITVLPG DGIGPDIVAE ALKVLELTGK KCGHTFLFTE ADLGGIAIDR HGEPLPQSTV 
DICKGSDAVL LGAVGGPKWD TLPGNKRPEA GLLGIRSALG LYANLRPAVI YSALKDASPL 
KSEIISNGID IMVIRELTGG MYFGKRGRLE TDGGEAAFDT EMYNVSEVKR IAKVGFETAM 
KRSKKLMSVD KANVLESSRL WRQVVVEVAK EYPEVTLSHM YVDNAAMQLV RNPAQFDVIL 
TSNIFGDILS DEASMITGSI GMLPSASLGA TKLGLFEPIH GSAPDIAGQD KANPIATILS 
VAMMLRYSLG LTEEADSIEK AVTDVLNKGY RTADIASSGT KVVGTKEMGK LIREHM