| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccel_0004 |
|---|
| Symbol | |
|---|
| ID | 7308927 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium cellulolyticum H10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011898 |
|---|
| Strand | + |
|---|
| Start bp | 2955 |
|---|
| End bp | 4073 |
|---|
| Gene Length | 1119 bp |
|---|
| Protein Length | 372 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 643606930 |
|---|
| Product | DNA replication and repair protein RecF |
|---|
| Protein accession | YP_002504372 |
|---|
| Protein GI | 220927463 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1195] Recombinational DNA repair ATPase (RecF pathway) |
|---|
| TIGRFAM ID | [TIGR00611] recF protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.370076 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGATTGTCA AAAACCTGGT TTTAGAGAAT TATAGAAACC ATACAAATAC AAGAATCTTA
TTTTCTGATC GTTTTAATAT TTTTTATGGT GATAATGGCC AAGGTAAAAC AAATATCCTT
GAAGCCATTT ATTTATGTGC GTCCGGGAGA TCTCACAGGA CATCAAGGGA CTCAGAATTA
ATAAAATTCG GTTGTGAAAA CTTTAGTATT GCGGTTCATG TATCAAAAAC CGGTGGTTTG
GATAAGGATA TTGAGATTAG TTATTATGAA AATCAAAAGA AGCAAATCAA GATAAATGAT
ATTCCTATAA AAAAAATAGG TGCACTTATG GGAAATCTTT ATGCTGTTTT GTTTTCCCCA
GAAGATTTAT TTATAGTAAA ACAGGGACCT ACTGAAAGAA GAAGGTTTGT TGATATTACA
CTCAGTCAGA TAAAACCATC CTATTTTTAT AATCTTCAAC AAATGTCAAA GATTCTTAAA
CAACGAAATA CATTACTCAA GAATATCAGC AGTAATCCCA AACTGATGGA TACTGTTGAT
ATATGGAATA TGAGGTTAGC CGAAGTTGCA GCAGCTATTA TTAAAGCAAG AAGAACTTTT
TCAATAATGC TGTCTGGAAT GGCTGAAAAT CAGCATAATT TTCTTACTGG TAAGAGTGAG
AAAATTTCCT TTGATTATAG GTGTAGTTTT CAAATTTCAG GGCAGGATGA TACAGAACAA
ATTGAAAAAC TCTATCTGGT ACAGCTTGAA AAAAGTATGC AGCGGGATAT AGTCCTTGGA
TATACTACTG TAGGTCCTCA TAGAGATGAT TATGATATTA TGATTAACGA TAAGAGCCTG
AAATTATATG GTTCTCAGGG ACAACAAAGA TCCGCAGTTC TGTCATTGAA AATTGCCGAA
ATTGAGTTAG TAAAAAAGGC GACAAACCAA TATCCTGTCC TACTTTTAGA TGATGTTATG
TCTGAATTGG ATAAGAATAG GCAAAAATAT TTAATGGACA GCATTAAGGA AGTTCAAACA
TTTATTACTT GTACAAATAA AGAGCATTTT GGAAATTTAT TATCAGCAAA CAGTAATTTT
TTTAAAATAG TTGGCGGAAA TATTCATAGT TGCATGTAA
|
|---|
| Protein sequence | MIVKNLVLEN YRNHTNTRIL FSDRFNIFYG DNGQGKTNIL EAIYLCASGR SHRTSRDSEL
IKFGCENFSI AVHVSKTGGL DKDIEISYYE NQKKQIKIND IPIKKIGALM GNLYAVLFSP
EDLFIVKQGP TERRRFVDIT LSQIKPSYFY NLQQMSKILK QRNTLLKNIS SNPKLMDTVD
IWNMRLAEVA AAIIKARRTF SIMLSGMAEN QHNFLTGKSE KISFDYRCSF QISGQDDTEQ
IEKLYLVQLE KSMQRDIVLG YTTVGPHRDD YDIMINDKSL KLYGSQGQQR SAVLSLKIAE
IELVKKATNQ YPVLLLDDVM SELDKNRQKY LMDSIKEVQT FITCTNKEHF GNLLSANSNF
FKIVGGNIHS CM
|
|---|
| |