| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mnod_7343 |
|---|
| Symbol | |
|---|
| ID | 7306581 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium nodulans ORS 2060 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011894 |
|---|
| Strand | + |
|---|
| Start bp | 7428650 |
|---|
| End bp | 7430497 |
|---|
| Gene Length | 1848 bp |
|---|
| Protein Length | 615 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 643604897 |
|---|
| Product | Hemolysin-type calcium-binding region |
|---|
| Protein accession | YP_002502385 |
|---|
| Protein GI | 220927083 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG2931] RTX toxins and related Ca2+-binding proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTTGATC ATCATTGGCC GGCATCGTGC ACCGGCAACT CTATCGAGCA CCTCTGTCGG
ATGCATGGGA GGCCTCACGT GGCAGACCCG ACCCCGAGTC AGTATTTCGA TGTCGCGAAG
TGGACCTACA CGCAAGGTCA ACCTTATCCT AGTGAGCTAA CTCCATTTTA CTTAAGGAAC
GGACAATTTG ACATCCTAGA TAACAGTACC GGTCTTTACG GAGCTGCGTT CAAATCACAA
GGCACAGATC CATACATAAT CGTCGGTTTT GAAGGAACAA ACCTGGGTCA TTTCTCTGAT
CAGCCAGAGT TTGTGACAAG CCAGATTGCT GCTGATTTCG ATATTTACGA AGGACGCATT
CCGCCGGCAT TTACAGAAGC ACTGAACTTT GCGAGAGCTG TAATTGCGGA GGCGTCAAAT
CAGGGCATTG CGACGGACAG AATTTTTCTT TCGGGTCACT CGCTTGGGGC TGCTGAGGCC
GAATACGTGG CGGCACAGCT CGGCCTCAGC GGAACGACTT ATGGTGCTCC AGGTATTATA
TCCAGCGCAG TACCTGATCC AGGCGGCAGC TTGTTGACGA ATAATGCCGA GTATGGTGAC
CCGGTCGCAA ATTACAGCTT CACACCTTTG CCTTATGAGA GCTTCTTTCT ACAAAGCGAT
CAGATCCAAC GGTATGGCTC TGCGCAATTC ATTGGTCCAG CAGATGATCC GACGGCAGGA
CGCGCAATTC TGATCGGAGC GGGTCTGGCT TTCGCACCAG GAATGAGCGC TGAGGCGAAA
GCTGCAGGGC TGGTCGCGCT GGCAGGGGCT GCAGCCGAAT TTCACCTTCT GGACCGATAT
CAAACAGATC TGGGAATTAC TTCAAGCATT CCGACGCCAG AATGGATGCA AACACTTACT
GCGGGGGACA TCATAAGCGT CTATGCAGAT GCAGTTGAGG ACCCGAGCGT CACAGCCCTC
CTCGGCAGCG ACGCTCTCGC GAACAATCTT CCGCAATTCG GCAGCTCTGA TCATGAGGTT
ATGACCGGCA CGTCGGAAAC CGACGAGATG CACGGCGGCC TCGGAAATGA TCTCATTCAT
GGGTTTGACA ATAATGATTC ACTCTACGGG GACAGTGGCA ACGATACGGT CTTTGGCGAT
GCGGGCAACG ACCTATTGAT TGGAGGAGGC GGCAACGACG AGCTGCGCGG GTTCCTAGGT
AACGATACTC TATTTGGGGA GTACGGCAAC GACTCCCTTT TTGGAGAGCA AGACAACGAT
CTTATTGACG GCGGGCGCGG TGATGATTTT GCCTCCGGCG GCTCCGGGAA TGATGAGGTG
CGCGGGGCGG CAGGTAACGA TCACCTGTTT GGCGATGAAG GCGATGATCG GGTCGACGGC
GGCGAGGGCG ACGATCAAGT TCGGGGCTGG TTCGGCAATG ACACGCTCTT TGGAAGCGAG
GGGAACGATC AAGTATTTGG CGAAGAGGAT GATGACTTCC TCGGTGCAGG AAGCGGCAAT
GACTATCTCA GCGGAGGTCT CGGCACCGAC TCGCTTTACG GGGAGGACGG CAACGACCTG
CTGTTCGGCA ATGCCGGCAA CGACGAGCTC GTGGGCGGCG CCGGCTCCGA CACCTTCGGG
TTCGGCCGCG GCGACGGCCA GGATCTCATC CGCGACTTCG TGACGGGCGG GCCTGAGCGG
GACGTGATCG CCTTCAACGG CGGCGTCTTC ACGTCCTTCG CCGCCGTCCA GGCGGCGAGC
CAGCAGGTCG GGGCAGATGT GGTCATCACC TACGGCGCGG GCGACACGAT CCGGCTACAG
AACGTCCAGG CCTCGAGCCT GACGGCGGCC AACTTCACCT TCAGCTGA
|
|---|
| Protein sequence | MLDHHWPASC TGNSIEHLCR MHGRPHVADP TPSQYFDVAK WTYTQGQPYP SELTPFYLRN
GQFDILDNST GLYGAAFKSQ GTDPYIIVGF EGTNLGHFSD QPEFVTSQIA ADFDIYEGRI
PPAFTEALNF ARAVIAEASN QGIATDRIFL SGHSLGAAEA EYVAAQLGLS GTTYGAPGII
SSAVPDPGGS LLTNNAEYGD PVANYSFTPL PYESFFLQSD QIQRYGSAQF IGPADDPTAG
RAILIGAGLA FAPGMSAEAK AAGLVALAGA AAEFHLLDRY QTDLGITSSI PTPEWMQTLT
AGDIISVYAD AVEDPSVTAL LGSDALANNL PQFGSSDHEV MTGTSETDEM HGGLGNDLIH
GFDNNDSLYG DSGNDTVFGD AGNDLLIGGG GNDELRGFLG NDTLFGEYGN DSLFGEQDND
LIDGGRGDDF ASGGSGNDEV RGAAGNDHLF GDEGDDRVDG GEGDDQVRGW FGNDTLFGSE
GNDQVFGEED DDFLGAGSGN DYLSGGLGTD SLYGEDGNDL LFGNAGNDEL VGGAGSDTFG
FGRGDGQDLI RDFVTGGPER DVIAFNGGVF TSFAAVQAAS QQVGADVVIT YGAGDTIRLQ
NVQASSLTAA NFTFS
|
|---|
| |