Gene Mnod_5866 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMnod_5866 
Symbol 
ID7301128 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium nodulans ORS 2060 
KingdomBacteria 
Replicon accessionNC_011894 
Strand
Start bp5972200 
End bp5973252 
Gene Length1053 bp 
Protein Length350 aa 
Translation table11 
GC content74% 
IMG OID643603484 
Productpolysaccharide deacetylase 
Protein accessionYP_002500997 
Protein GI220925695 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0726] Predicted xylanase/chitin deacetylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.621256 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCTCCG CCGAGACCCG TCTCCGCCTG TTCCGCGCCG GGTTCGCGGC CATCGCCACG 
ACCCGGGCCG ATTACTGGCT CGCGCCCGCC GCGCGGGGGC TCGGGGTGAT CCTGACCTTC
CACCATGTGC GGCCCGAGCC GCCGGGCGCC TATGCGCCGA ACCGCCTGCT CGCGATCACG
CCGGACTTCC TCGACCGCGT GCTGACGATC CTGCGCCGCC GCGGCTTCGA CCTGATCGGC
CTCGATGCGG TGCCCGGGCG CCTGCGCCGG CCGGAGGCGC GGCCCTTCGC CGTCCTCACC
TTCGACGATG GCTACCGCGA CACCCGCGAC CATGCCCGTC CGGTGCTGCT CCGGCACGGC
GCGCCCTGGA CGCTCTTCGT CACGACCGAC TTCGCGGAGG GAGCCGGCCG GCTCTGGTGG
CTGGAGCTCG AACGGGCGAT CCTCCGCCTC GACCGGGTGC GGGTGCCGGA GGCCGGCCTC
GACCTGCCGG CCGCCGATGC CGCGCAGAAG AGCGCGGCCT TCGTGCAGGT CTACCGGGCC
CTGCGCGCCG GTGCCGAGGA GAGGCTGCGC GCAGCCATCG CGCGGCTCGC CCGCGAGGCG
GGCCTGGACG CAGCCGCCAT CGCCCGGGAG CTCTGCCTCG GCTGGGACGA ACTGCGCGCG
CTCGCGGAGG ATCCCGACGT GACGATCGGG GCGCATACCC TGTCCCACCC GATGCTCGCC
AAGCACGACG CCGCGACCGC GCGGCGGGAG ATCGCGGAAT CACGCGCGAT CCTCGCAGCC
CGACTCGGAC GGGTGCCGCA GCATTTTTCC TATCCGGTGG GTGATCCGAC CTCGGCCGGC
CCGCGGGACT TCGCGCTCGC CGCCGCGGCG GGCTTCGCCA CCGCGGTGAC GACGCGGCCG
GGCCACCTCT TCGCGGCCCA TGCCGAGCAT CTCCACGCCC TGCCGCGGGT TTCGGTCAAT
GGCTGTTTCC AGACCGACGC GGCGCTTGCG GCGCTTCTCT CGGGCGTGCC GTTCCTGGCC
TGGAACCGCG GGCGGCGGCT CAATGTGGCC TGA
 
Protein sequence
MLSAETRLRL FRAGFAAIAT TRADYWLAPA ARGLGVILTF HHVRPEPPGA YAPNRLLAIT 
PDFLDRVLTI LRRRGFDLIG LDAVPGRLRR PEARPFAVLT FDDGYRDTRD HARPVLLRHG
APWTLFVTTD FAEGAGRLWW LELERAILRL DRVRVPEAGL DLPAADAAQK SAAFVQVYRA
LRAGAEERLR AAIARLAREA GLDAAAIARE LCLGWDELRA LAEDPDVTIG AHTLSHPMLA
KHDAATARRE IAESRAILAA RLGRVPQHFS YPVGDPTSAG PRDFALAAAA GFATAVTTRP
GHLFAAHAEH LHALPRVSVN GCFQTDAALA ALLSGVPFLA WNRGRRLNVA