| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mnod_5350 |
|---|
| Symbol | |
|---|
| ID | 7301939 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium nodulans ORS 2060 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011894 |
|---|
| Strand | + |
|---|
| Start bp | 5426296 |
|---|
| End bp | 5427198 |
|---|
| Gene Length | 903 bp |
|---|
| Protein Length | 300 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 643602982 |
|---|
| Product | response regulator receiver modulated diguanylate cyclase |
|---|
| Protein accession | YP_002500498 |
|---|
| Protein GI | 220925196 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
|---|
| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.315516 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCACATCG TCGTGGTCGA TCCGAGCCGG GTCGTGCTGA AGGTGATCAG CTCGCTTCTC
GACCCTCGCG GCTACATCGT GAACACCTTC ACGGATTCGC GGGAGGCGCT CGACTACATC
ACCACCCATA GGTCGGTGAC GGCGCTGATC ACCAGCCTTG AGGTCCGGCC TCTGAGCGGG
CTCGAACTGT GCTGGTCCGC CCGCCTCCTC GCGGATGCAC ACCGGCCGCT CTACATCATC
ACCATGTCGT CGGCCCGCAA CGCCCGCAAT CTCGCGGAGG CGCTCGACAG CGGCTCGGAC
GATTTCATCG ACAAGCCCCC GGGCGCCGAG GAGCTCTATG CCCGCCTGCG GGCCGCCGAC
CGCATGACCC GGATGCAGCG CGAGCTGATC CGCCTCGCGG AGACCGATAT GCTCTCGGGC
CTCCTCAACC GCCGCGCCTT CCTCCAGCGC GTGACGGATG CCGCCGAGCG CGCGGGCGAT
CACGGCCGCC TCGGCCTGGT CCTGGCCGAC ATCGACCACT TCAAGCGGAT CAACGACGAG
AACGGCCACG ACGTCGGCGA CCTCGCCATC CAGGGCGTCG CGCAGGCGCT CTGCGAGATC
CCGGACGGCA TCGTCGGACG GCTGGGCGGT GAGGAATTCG GCATTGCCCT GCCCGGACGG
ACGCTGGAAG AGGCGGAGGC CGCGGCCAAC CGTATACGCC TGCGCTGCAC CCATCTGCGC
TTCAAGGGCG CCCGCGGCCC GGTCCAGCTC ACCTGCAGCT TCGGCGTGAG CGCGTGGTCC
GAGGGCGAGA CGGTGGCGAG CCTCCACAAG CGGGCGGACA TCGCCCTCTA CGAAGCGAAA
TCGATCGGGC GCAACCGTGT GGTCTCCGCA TTCGCGGACC TCATCCTCGC CCGGGCGGGC
TGA
|
|---|
| Protein sequence | MHIVVVDPSR VVLKVISSLL DPRGYIVNTF TDSREALDYI TTHRSVTALI TSLEVRPLSG
LELCWSARLL ADAHRPLYII TMSSARNARN LAEALDSGSD DFIDKPPGAE ELYARLRAAD
RMTRMQRELI RLAETDMLSG LLNRRAFLQR VTDAAERAGD HGRLGLVLAD IDHFKRINDE
NGHDVGDLAI QGVAQALCEI PDGIVGRLGG EEFGIALPGR TLEEAEAAAN RIRLRCTHLR
FKGARGPVQL TCSFGVSAWS EGETVASLHK RADIALYEAK SIGRNRVVSA FADLILARAG
|
|---|
| |