Gene Mnod_5120 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMnod_5120 
Symbol 
ID7302298 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium nodulans ORS 2060 
KingdomBacteria 
Replicon accessionNC_011894 
Strand- 
Start bp5181581 
End bp5182213 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content73% 
IMG OID643602751 
Productisochorismatase hydrolase 
Protein accessionYP_002500269 
Protein GI220924967 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1335] Amidases related to nicotinamidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATCGAGC CCTGCGACAC GGACGTCCTC CTCGTGGTGG ACGTCCAGCG CGACTTCCTG 
CCGGGCGGCG CCCTCGCGGT GCCGGACGGC GACGCCGTGG TGGCGCCGAT CACGGCGCTC 
GGCCGGCTTT TCCCGCATGT CGTCCTCACG CAGGACTGGC ATCCGCCGGG CCATGCCTCC 
TTCGCATCGA GCCATCCGGG CCGGCAGCCC TTCGACACCA TCGCGCTCGC CTATGGCGAG 
CAGGTGCTCT GGCCGGACCA TTGCGTGATG GGCACCTCCG GCGCGGCCCT GGCGGAGGGG 
CTCGACCTGC CGCATGCGGA GCTGGTGATC CGCAAGGGCT ACCGGCGGTC CATCGACAGC 
TACTCGGCCT TCGTCGAGGC GGACCGGCGC ACCCCCACCG GGCTCGCGGG CTACCTGCGC 
GAGCGGGGCA TCACCCGGGT CGTGCTGTGT GGGCTGGCGA CGGATTACTG CGTCGGCTGG 
AGTGCGCTCG ACGCGCGGGC GGCCGGTTTC GAGGCCGTGC TGGTAGAGGA TGCTTGCCGC 
GCCATCGACC AGGGCGGCTC GCTGGCGCGG GCCTTCGCGG CGATGGACGC GGCGGGGGTG 
GCGCGGGTTC GCGCGGAGGC GGTGGCCGGC TGA
 
Protein sequence
MIEPCDTDVL LVVDVQRDFL PGGALAVPDG DAVVAPITAL GRLFPHVVLT QDWHPPGHAS 
FASSHPGRQP FDTIALAYGE QVLWPDHCVM GTSGAALAEG LDLPHAELVI RKGYRRSIDS 
YSAFVEADRR TPTGLAGYLR ERGITRVVLC GLATDYCVGW SALDARAAGF EAVLVEDACR 
AIDQGGSLAR AFAAMDAAGV ARVRAEAVAG