Gene Mnod_5025 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMnod_5025 
Symbol 
ID7303718 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium nodulans ORS 2060 
KingdomBacteria 
Replicon accessionNC_011894 
Strand- 
Start bp5098862 
End bp5099566 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content54% 
IMG OID643602657 
Producttranscriptional regulator, GntR family 
Protein accessionYP_002500176 
Protein GI220924874 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGCAC GAAACGATAT GGCCGGACAC AAGCATAACG ATCGAGACGA GGAAACAGGG 
GTTTATCTAA AGATAAAGAA GGATGTCGTC TACAATCAGT TCGCCCCACG CAGTCAGCTC 
AAACTTAAAG AGCTTTCTGA CAAGTACGGC TTCGGTGATA CACCCGTCCG CGACGCGTTG 
ATCAAACTGG CGACCGAAGG GTTGATCGAA TATATTCCTT ATAAGGGCTA TTTCACCAAG 
CCCATGACGG TCCTCAGGTT CACTCAACAC TATGATGCGG CATTAGTTCT CCTGAAGTAC 
GCAATCCAGT CGGGTCCTTC GTCCTTTACG ACCGAAGAGC CCTGCCCGTC TTATTTGTTC 
GGCGAACCCG CACCGACCGG AGAAGCCGAA ACAACACCCT CCCATGCCCG GGACATTGAG 
AGCCTCTATG GGAGGATTGC GGCCATGTCC GAAAATTCCG AGGTCATGTC GCTAATCGGA 
CGCTTTATTG ACCATACGAG ATACATTCGC GAGCTTGGTC TCGAACAAAC CGAAGGCCGA 
GGGACAATCG TCGAGGGCAT GATCTGCTTG GTCAAACTGC TTGCCGCTGG CGATCGCACT 
GCGGCGATCG AGATTCTGAC CGTGCTGTTC GATCAAAAGA TCGCTCTCCT GGCCGAGTCG 
GTCAAAGAAG GAAACAACCG CGCCCTCGGC GCGGTCCGGA GCTGA
 
Protein sequence
MSARNDMAGH KHNDRDEETG VYLKIKKDVV YNQFAPRSQL KLKELSDKYG FGDTPVRDAL 
IKLATEGLIE YIPYKGYFTK PMTVLRFTQH YDAALVLLKY AIQSGPSSFT TEEPCPSYLF 
GEPAPTGEAE TTPSHARDIE SLYGRIAAMS ENSEVMSLIG RFIDHTRYIR ELGLEQTEGR 
GTIVEGMICL VKLLAAGDRT AAIEILTVLF DQKIALLAES VKEGNNRALG AVRS