Gene Mnod_5000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMnod_5000 
Symbol 
ID7307561 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium nodulans ORS 2060 
KingdomBacteria 
Replicon accessionNC_011894 
Strand
Start bp5076728 
End bp5077270 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content64% 
IMG OID643602638 
ProductNUDIX hydrolase 
Protein accessionYP_002500157 
Protein GI220924855 
COG category[L] Replication, recombination and repair
[R] General function prediction only 
COG ID[COG0494] NTP pyrophosphohydrolases including oxidative damage repair enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.20966 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCGCGA AAGCTTGGTC GGTTCGTGGG TCCAGCCGCC CGCTTGAGAG CCGCTGGATC 
AGCATCCGGG CCGACGATTG CGTCACGGCG ACGGGTGCAG GCATCTCACC CTTCTACGTG
ATCGAGTCAC CCGACTTCGT GCACGTGCTC GCACTGGAGC AGGAGGGGCG GGTCGTCCTC
GTGCGCCAGT ACCGCCACGG CTACGGAGGT ATGAGCCTCG AACTGCCGGG AGGGCTGATC
GATCCGGGCG AGAAGAACAT TGTGGCGGTG GCTGCGCGGG AGCTGTTGGA GGAGACCGGG
TATGGCGGCG GGCACCTGTC TCACTTGGCG ACCTTGAGCA TCGACCCGTC GCGCTATGCC
AACCGTCAGC ACCTTGTATG CGCCCGCGGC GTCGTTCTCG GGCAGGCTAA TCCTGAACCG
ACTGAAGACA TCGACGTGGT CGTTGTCTCA CGCGAGGAGG CGCAGGATCT TGCAGTGTCT
GGGGCGATCA TCAATGCGGC ACATATCGGC CTTCTGATGA TGGGCCTGTC TATGACCGGG
TAG
 
Protein sequence
MAAKAWSVRG SSRPLESRWI SIRADDCVTA TGAGISPFYV IESPDFVHVL ALEQEGRVVL 
VRQYRHGYGG MSLELPGGLI DPGEKNIVAV AARELLEETG YGGGHLSHLA TLSIDPSRYA
NRQHLVCARG VVLGQANPEP TEDIDVVVVS REEAQDLAVS GAIINAAHIG LLMMGLSMTG