| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mnod_4838 |
|---|
| Symbol | |
|---|
| ID | 7307920 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium nodulans ORS 2060 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011894 |
|---|
| Strand | + |
|---|
| Start bp | 4927827 |
|---|
| End bp | 4929623 |
|---|
| Gene Length | 1797 bp |
|---|
| Protein Length | 598 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 643602483 |
|---|
| Product | putative oxalyl-CoA decarboxylase |
|---|
| Protein accession | YP_002500003 |
|---|
| Protein GI | 220924701 |
|---|
| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
|---|
| TIGRFAM ID | [TIGR03254] oxalyl-CoA decarboxylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.476433 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAACCA TCGTCAAGAC GCAGGCCAAG CCGGCCACCG ACATCGATCC GGGCGCCGTC
GCGTCGAGCG TGACGGCACA GGGCGGGCAG GCCGAGGGGC ACGGAGAGCT GACCGACGGC
TTCCATCTCG TCATCGACGC CCTCAAGCTC AACGGCATCA ACACGATCTA CGGCGTGCCC
GGGATCCCGA TCACGGATCT CGGCCGCCTC GCCCAGGCCG AGGGCATGCG GGTCATCTCC
TTCCGCCACG AGCAGAATGC CGGCAACGCG GCTGCCATTG CGGGCTTCCT CACCAAGAAG
CCGGGCATCT GCCTCACCGT CTCCGCACCG GGCTTCCTGA ACGGCCTCAC GGCGCTCGCC
AATGCCACCA CCAACTGCTT CCCGATGATC CTGATCAGCG GCTCGTCGGA GCGCGAGATC
GTCGACCTGC AGCAGGGCGA CTACGAGGAG ATGGACCAGC TCGCCATCGC CAAGCCCCTG
TGCAAGGCGG CCTTCCGGGT CCTGCACGCG GCCGATATCG GCATCGGCGT GGCGCGCGCG
ATCCGGGCCG CCGTCTCGGG GCGTCCGGGC GGCGTCTATC TCGATCTGCC GGCGAAGCTC
TTCTCGCAGG TCATGGATGC GGAGGCCGGC GCCAAGTCGC TGGTGAAGGT CATCGACCCG
GCTCCCGCCC AGCTCCCGGC GCCGGCCGCC GTGCAGCGGG CCCTCGGCCT CCTCAAGGGC
GCCAAGCGGC CCCTGATCAT CCTCGGCAAG GGCGCCGCCT ACGCCCAGGC CGATGACGCG
ATCCGCGCCC TCGTCGAGAG GAGCGGCATC CCGTACGTGC CGATGAGCAT GGCCAAGGGC
CTCCTGCCCG ACACGCATCC GCTGTCGGCC GGTGCAGCGC GCTCCCTCGT CCTCAAGGAC
GCCGATGTGG TGCTGCTGGT GGGCGCGCGC CTCAACTGGC TCCTGTCGCA CGGCAAGGGC
AAGACCTGGG GCGAGCCGGG CTCCAAGAAG TTCATCCAGA TCGACATCGA GCCGCGGGAG
ATGGACAGCA ACGTCGAGAT CGCCGCGCCG CTCGTGGGCG ATATCGGCTC CTGCGTCTCC
GCCCTGCTCG ACGGCATGGG CGAGAACTGG CCGGCCCCGC CCTCCGACTG GACGGCGACG
ATCGCCGAGC GCAAGGAGGC CAATCTCTCC AAGATGGCCG CCAAGCTGCG CAAGAACACC
GCGCCGATGG ACTTCCACAG CGCGCTCGGG GCCCTGCGCA CCGTCATCAA GGAGCGGCCG
GACGCGATCC TCGTCAACGA GGGCGCCAAC ACGCTCGACC TCGCCCGCTC CGTCATCGAC
ATGTACCAGC CGCGCAAGCG CCTCGATGTC GGCACCTGGG GCGTGATGGG GATCGGCATG
GGCTTCGCGA TCGCCGCGGC GATCGAGACC GGCAAGCCGG TGCTCGCCGT CGAGGGCGAC
AGCGCCTTCG GCTTCTCCGG CATGGAGATC GAGACCATCT GCCGCTACAA CCTGCCGGTC
TGCGTCGTCA TCTTCAACAA CAACGGCATC TATCGGGGCA CCGACACCGA CCCGACCGGA
CGCGATCCCG GCACGACCGT GTTCGTCAAG GACTCGCGCT ACGACCGGAT GATGGAGGCC
TTCGGCGGCG TCGGCGTCCA CGCGACCACG CCCGACGAGC TCAGCCGCGC GGTGAACGAG
GCGATGGATT CGGGCCGGCC GACGCTCATC AACGCGGTGA TCGACCCGCA GGCCGGCACC
GAGAGCGGCA ATATCGGCAG CCTCAACCCG CAGAGCTCCG TCCGCAAGAA GAAGTGA
|
|---|
| Protein sequence | METIVKTQAK PATDIDPGAV ASSVTAQGGQ AEGHGELTDG FHLVIDALKL NGINTIYGVP
GIPITDLGRL AQAEGMRVIS FRHEQNAGNA AAIAGFLTKK PGICLTVSAP GFLNGLTALA
NATTNCFPMI LISGSSEREI VDLQQGDYEE MDQLAIAKPL CKAAFRVLHA ADIGIGVARA
IRAAVSGRPG GVYLDLPAKL FSQVMDAEAG AKSLVKVIDP APAQLPAPAA VQRALGLLKG
AKRPLIILGK GAAYAQADDA IRALVERSGI PYVPMSMAKG LLPDTHPLSA GAARSLVLKD
ADVVLLVGAR LNWLLSHGKG KTWGEPGSKK FIQIDIEPRE MDSNVEIAAP LVGDIGSCVS
ALLDGMGENW PAPPSDWTAT IAERKEANLS KMAAKLRKNT APMDFHSALG ALRTVIKERP
DAILVNEGAN TLDLARSVID MYQPRKRLDV GTWGVMGIGM GFAIAAAIET GKPVLAVEGD
SAFGFSGMEI ETICRYNLPV CVVIFNNNGI YRGTDTDPTG RDPGTTVFVK DSRYDRMMEA
FGGVGVHATT PDELSRAVNE AMDSGRPTLI NAVIDPQAGT ESGNIGSLNP QSSVRKKK
|
|---|
| |