Gene Mnod_4408 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMnod_4408 
Symbol 
ID7303050 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium nodulans ORS 2060 
KingdomBacteria 
Replicon accessionNC_011894 
Strand
Start bp4455222 
End bp4455923 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content75% 
IMG OID643602056 
Producthaloacid dehalogenase, type II 
Protein accessionYP_002499582 
Protein GI220924280 
COG category[R] General function prediction only 
COG ID[COG1011] Predicted hydrolase (HAD superfamily) 
TIGRFAM ID[TIGR01428] 2-haloalkanoic acid dehalogenase, type II
[TIGR01493] Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCATCC AGGCCCTGAT CTTCGACGTC TTCGGCACCC TGCTCGACTG GCACGGCGGC 
GTCGCCCGCG AGGCGGCGCG CCTGCTCGGC CCCCTGCGCC CCGACCTCGA CGGCGGCGCC
TTCGCGCGGG CGTGGCGCGA CCGCTATCAG CCCGGCATGG AGCCGATCCG CCAGGGCGCG
CGCGATTTCG CGGATCTCGA CACGCTCCAC GCCGAGAGCC TGGAGGAGGT GCTCGCGGCC
GAGGGCCTCG GCTCCGTCGC GCCCGAGACC AAGCGGGAGC TGGTCCTCGC CTGGCACCGG
CTCGACGCTT GGCCCGACGT CGCCGAGGGA CTTGGCCGCC TGAAGCCGCG CGTCCTGCTG
GCGCCCTGCT CCAACGCCCA TATCCGGCTC GCCATCGCCC ATGCGCGCCG CAACGGCCTG
CCCTGGGACG CGATCCTCGG GGCCGAGCTC GCCCGCGACT ACAAGCCGAA ACCCGCCGTC
TACCTGCGGG CCGTCGAGGC GCTGCGGCTC GCCCCCGGCG AGGTCATGAT GGTCGCGGCC
CATTCCTCGG ATCTCGCCGC CGCGGCCGCC TGCGGCCTCG CCACGGCCCA CATCGCCCGC
CCCGACGAGA AGGGGCCGGG TACCGGCGAG ACCGCGCCGA GCGTGCCCGT CGATATCGCC
GCACGGGATA TCGGCGACCT CGCCCGGCAG CTCGGCTGCT GA
 
Protein sequence
MAIQALIFDV FGTLLDWHGG VAREAARLLG PLRPDLDGGA FARAWRDRYQ PGMEPIRQGA 
RDFADLDTLH AESLEEVLAA EGLGSVAPET KRELVLAWHR LDAWPDVAEG LGRLKPRVLL
APCSNAHIRL AIAHARRNGL PWDAILGAEL ARDYKPKPAV YLRAVEALRL APGEVMMVAA
HSSDLAAAAA CGLATAHIAR PDEKGPGTGE TAPSVPVDIA ARDIGDLARQ LGC