Gene Mnod_3960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMnod_3960 
Symbol 
ID7307412 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium nodulans ORS 2060 
KingdomBacteria 
Replicon accessionNC_011894 
Strand
Start bp4033607 
End bp4034314 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content62% 
IMG OID643601623 
ProductABC transporter related 
Protein accessionYP_002499153 
Protein GI220923851 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0410] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGTTC TGTCCATCGA GGGCCTGAAG GGTGGCTATG GAGAGGTCGA TATCCTGAAC 
GGCGTCGACC TTGAGCTCGA AGCAGGCGAA ATACTGACCG TCGCCGGAAC AAACGGTGCG
GGCAAATCGA CCCTCGCGAA AGCCGTCGTC GGGCTGCTGC CGCGCGTGGA GGGGAATGTG
CGTCTCGGAG GAAGAGACGT CACGCGTCTG GCAACTGAGA AGCGGGCTCA GAACGGTATC
GGCTACGTGC CACAGGTGGC CAATGTCTTT CCTTCGCTGA CGATCGTCGA GAACCTCGAA
GTCGTCCAGG GAGTGCGTGA CGCAAAGGCG CGCATTGCCG AAGTGTTCAG CCTCTTCCCC
GCTTTGGCCG AACGCAAGCG CGCGCGTGCA GGGAGGCTCT CCGGCGGCGA GCGTCAGCAA
CTGGCCTATG CGAGAGCCCT CATGACACGG CCTCGCGTGG TGGTGCTCGA CGAACCAACG
GCCGCCCTCT CTCCCGCATT GGTCGCCGAC AGCTTCTCTC GCATCGCATC CCTGGCAGCG
GACGGAACCA GTATCCTTCT GATCGAGCAA AGGGCCCGAC AAGCGTTGGC CATCTCAAAC
CGTGGCGCGA TCATGGATGG TGGGCGCGTC GAGATGGCGG GCCCAGCGAA CGAATTGCTC
AACGACGAGA AGGCAGCGGC TCTGTATCTC GGGCGTTATT CCACCTGA
 
Protein sequence
MSVLSIEGLK GGYGEVDILN GVDLELEAGE ILTVAGTNGA GKSTLAKAVV GLLPRVEGNV 
RLGGRDVTRL ATEKRAQNGI GYVPQVANVF PSLTIVENLE VVQGVRDAKA RIAEVFSLFP
ALAERKRARA GRLSGGERQQ LAYARALMTR PRVVVLDEPT AALSPALVAD SFSRIASLAA
DGTSILLIEQ RARQALAISN RGAIMDGGRV EMAGPANELL NDEKAAALYL GRYST