Gene Mnod_3500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMnod_3500 
Symbol 
ID7308865 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium nodulans ORS 2060 
KingdomBacteria 
Replicon accessionNC_011894 
Strand
Start bp3620556 
End bp3621353 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content66% 
IMG OID643601170 
ProductIntegrase catalytic region 
Protein accessionYP_002498714 
Protein GI220923412 
COG category[L] Replication, recombination and repair 
COG ID[COG2801] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCCGCGGG GCCGCGCCGA CGAGGCGGCG CTCGTCGCTG ATCTCATCGA GCTGGCCCGC 
CAGTACGGGC GTTACGGCTA CCGCAAGATC GCCGCGCTGT TGCGGGCAGC CGGGTGGCTG
GTCAACGACA AGCGGGTCGA GCGGATCTGG CGGCAGGAGG GCCTGAAGGG GCCCGCCCGG
CAGCCCAAAA AGGGCCGGCT GTGGGACAAA GACGGCTCCT GCCTGCGGCT GCGGCCCGAG
CACCGCAACC ACGTTTGGTC GGATGACTTC GTCGAGGCGC GCACCCACGA TGGACGCAAG
TTCCGCCTGC TCAACGTCCT CGACGAGTTC ATGCACGAGA GCCTGGCCAT CCGGGTGGCT
CGCAAGCTCA AGGCAGCGGA CGTGATCGAC GTGCTCTCGG ACCTGTTCAT CCTGCGTGGC
GTGCCCACGC ATCTTCGGTC CGACAATGGA CCTGAGTTCG TCGCGAAGTC TGTCCAGAAA
TGGATCACGG CGGTGGGTGC CAAGACCGCG TACATCACGC CGGGCTCACC CTGGGAGAAT
GGTTATATCG AGAGCTTCAA CGCTCGCCTG AGGGACGAGC TACTGAATGG GGAGATCTTC
TACACCTTAC GCGAAGCCCA GATCATCATC GAGAGTTGGA GGAGACATTA CAACGGCGTG
CGCCCGCATG CCTCATTGGG GTACCGGCCG CCGGCTCCAG AGGTGTTCGT GCCCGCCGTG
ACCGCTTGGC CGGCTGCGCT CGCCCGACCG GCTTCGCCGG CCAAGCTACC CGTGGTGGAC
AGGCCAACCG TCCACTAA
 
Protein sequence
MPRGRADEAA LVADLIELAR QYGRYGYRKI AALLRAAGWL VNDKRVERIW RQEGLKGPAR 
QPKKGRLWDK DGSCLRLRPE HRNHVWSDDF VEARTHDGRK FRLLNVLDEF MHESLAIRVA
RKLKAADVID VLSDLFILRG VPTHLRSDNG PEFVAKSVQK WITAVGAKTA YITPGSPWEN
GYIESFNARL RDELLNGEIF YTLREAQIII ESWRRHYNGV RPHASLGYRP PAPEVFVPAV
TAWPAALARP ASPAKLPVVD RPTVH