Gene Mnod_3438 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMnod_3438 
Symbol 
ID7308803 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium nodulans ORS 2060 
KingdomBacteria 
Replicon accessionNC_011894 
Strand+ 
Start bp3559116 
End bp3560135 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content68% 
IMG OID643601111 
ProductTRAP dicarboxylate transporter, DctP subunit 
Protein accessionYP_002498655 
Protein GI220923353 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component 
TIGRFAM ID[TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGATCA TCCTGTCGCG GCGGCGCTTC GCGACCTTGG GCGCCACGGC GGTCATCGGG 
GCGGCGCTCC CCTTACGCTA CGCGCGCGCC GCCGAGTTCA CCTTCAAGTG GGGCACGAAC 
GTCCCGGAGA CGCACCCGCT CAACGTCCAT GCCCGCAAGG CCGCCGCCGC GCTCCAGGAG 
GCCACCGGCG GCAGGGTCGA GCTGCAGCTC TTTCCCAACA ACCAGCTCGG GGGCGACTCC 
GACATGTTCT CGCAGCTGCG CTCCGGCGCG CTCGAATGCT TCACGCTGTC CGGCGTCAAC 
GTGCTCTCGA CGCTCATTCC CGCGGCGGCG ATCTCCGGGG TGGGCTTCGC CTTCAAGGAT 
TATCCGACCC TGTGGAGGGC CCTCGACGGC CGGCTCGGCG AGCACCTGCG GGGCCAGATC 
GGCAAGGCCG GCCTCGTCGT CATGGAGAAG ATCTGGGACA ACGGCTTCCG GCAGATCACG 
ACCAGCACGC GGCCGGTGGT CACGCCCGCC GACCTCAAGG GCATGAAGAT CCGCGTCCCG 
GTCAGCGCGC TCTGGACCTC CCTGTTCAAG TCGCTCGGCG CCTCGCCGAC CGGCATCAAC 
TTCGCCGAGG TGTATTCCGC CCTGCAGACC AAGATCGTGG ATGGGCAGGA GAACCCGCCG 
GCGATCATCT CGGCGGCGAA GCTCTACGAG GTGCAGAAGT ACTGCTCGCT CACCAACCAC 
ATGTGGGACG GCTGGTGGTT CCTGATGAAC CGCCGCGCGT GGGGCCAGCT CCCGCCCGAC 
CTGCAGGAGA CGTTCGCGCG CGTCGTCAAT GCGGCGGCGC TCGCCGAACG CCAGGAGGTG 
GCGCGGCAGA ACGACAGCCT GAAGACAGAC CTCGCCGCCA AGGGACTGAT CTTCAACGAG 
GTCGATCCCG CCCCCTTCCG GGAGACGCTG ACGAAGTCCG GCTTCTACAA GGACTGGAAG 
GCGAAGTTCG GCCCGGAAGC CTGGGCGATC CTGGAGGACT CGACCGGCGA GCTCGCCTGA
 
Protein sequence
MTIILSRRRF ATLGATAVIG AALPLRYARA AEFTFKWGTN VPETHPLNVH ARKAAAALQE 
ATGGRVELQL FPNNQLGGDS DMFSQLRSGA LECFTLSGVN VLSTLIPAAA ISGVGFAFKD 
YPTLWRALDG RLGEHLRGQI GKAGLVVMEK IWDNGFRQIT TSTRPVVTPA DLKGMKIRVP 
VSALWTSLFK SLGASPTGIN FAEVYSALQT KIVDGQENPP AIISAAKLYE VQKYCSLTNH 
MWDGWWFLMN RRAWGQLPPD LQETFARVVN AAALAERQEV ARQNDSLKTD LAAKGLIFNE 
VDPAPFRETL TKSGFYKDWK AKFGPEAWAI LEDSTGELA