| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mnod_3411 |
|---|
| Symbol | |
|---|
| ID | 7308776 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium nodulans ORS 2060 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011894 |
|---|
| Strand | + |
|---|
| Start bp | 3530375 |
|---|
| End bp | 3530926 |
|---|
| Gene Length | 552 bp |
|---|
| Protein Length | 183 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 643601086 |
|---|
| Product | transcriptional regulator, XRE family |
|---|
| Protein accession | YP_002498630 |
|---|
| Protein GI | 220923328 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1396] Predicted transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGAACG ACGGTGTGGG AGCGCGGCTG CGCTACGTGC GGCTCCGGCA CGGCCTGTCG
CAGCGCGCGC TCGCCAAGAA GGCCGGGGTC GTGAATTCGA CGATCTCGCT GATCGAGTCC
GGCAAGGCCA ATCCCTCGGT CGGGGCGCTC AAGCGCATCC TCGACGCGGT GCCAATCGGC
TTGGCGGAGT TCTTCTCTCT CACGCCGGAC CGGTCCGAGA AGGCGTTCTA TGCCAGCGAG
GAACTGGTCG AGATCGGGAA GGGGCGCATC TCCTACCGCC AGGTCGGCGA TGCCCTGTTC
GGTCGTGCGC TGCAGCTGCT CAAGGAGCGC TACGAGCCGG GCGCGGATAC CGGGCGCATC
CCGCTCGCCC ATGACGGCGA GGAGGGCGGC ATCGTGCTGT CGGGGCGGCT CGAAGTGACG
GTCGACGACG AGCGACGCAT CCTTGGGCCC GGGGACGCGT ATTACTTCTC AAGCCGCCGC
CCCCACCGCT TCCGGTGCAT CGGCCCACTA CCATGCGAGG TCGTTAGTGC CTGCACTCCG
CCCAGCTTCT AA
|
|---|
| Protein sequence | MTNDGVGARL RYVRLRHGLS QRALAKKAGV VNSTISLIES GKANPSVGAL KRILDAVPIG
LAEFFSLTPD RSEKAFYASE ELVEIGKGRI SYRQVGDALF GRALQLLKER YEPGADTGRI
PLAHDGEEGG IVLSGRLEVT VDDERRILGP GDAYYFSSRR PHRFRCIGPL PCEVVSACTP
PSF
|
|---|
| |