Gene Mnod_3339 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMnod_3339 
Symbol 
ID7301764 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium nodulans ORS 2060 
KingdomBacteria 
Replicon accessionNC_011894 
Strand
Start bp3448911 
End bp3451157 
Gene Length2247 bp 
Protein Length748 aa 
Translation table11 
GC content69% 
IMG OID643601020 
ProductDNA topoisomerase IV subunit A 
Protein accessionYP_002498565 
Protein GI220923263 
COG category[L] Replication, recombination and repair 
COG ID[COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit 
TIGRFAM ID[TIGR01062] DNA topoisomerase IV, A subunit, proteobacterial 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGCAAGC CATTCGAGCC GCCATCCGAT CACGGGGGAA TCGAGAGCGT CGAGCTGAAG 
GCCGCGCTGG AGGAGCGCTA CCTCGCCTAT GCGCTCTCGA CCATCATGCA CCGGGCGCTG
CCCGATGCGC GTGACGGGCT CAAGCCCGTG CACCGGCGCA TCCTCTACGG CATGCGCCTC
CTGCGCCTCG ACCCGAATAC GGCCTTCAAG AAATGCGCCA AGATCGTCGG CGACGTGATG
GGCGATTTCC ATCCGCACGG CGACCAGGCG ATCTACGACG CGCTCGTGCG CCTGAGCCAG
GACTTCGCGC AGCGCTATCC GCTCGTCGAC GGCCAGGGCA ATTTCGGCAA TATCGACGGC
GACGGCCCCG CCGCCTACCG CTACACCGAG GCGCGGCTGA CCGAGGTCGC GCGCCTCCTC
CTCGACGGCA TCGACGAGGA CGCGGTCGAT TTCCGCCCGA GCTACAACGG CGAGAAGGAC
GAGCCGGTCG TCCTGCCGGG CGCCTTCCCG AACCTGCTCG CCAACGGCTC GCAGGGCATC
GCGGTCGGCA TGGCCACCTC GATCCCGCCG CACAACGCGG CCGAGCTCTG CGACGCCGCC
CTCTACCTGA TCACCCATCC GACCGCGACG TCCGAGCAGC TTACGAGCTT CGTGAAGGGG
CCGGACTTCC CGACCGGGGG CATCGTGGTC GATTCCGCGG AAGCGATCGC CGAGGCCTAC
CGCACCGGGC GGGGCGCCTT CCGGGTCCGC GCGCGCTGGA CCAGGGAGGA TCTCGGCCGC
GGCGCCTGGA ACGTGGTGGT CACCGAGATC CCCTATGGCG TGCCGAAGGC CCGGCTGATC
GAGAAGATGG CCGAGCTCCT CACGGAGCGG AAGCTGCCGC TCCTCGCCGA TGTCCGCGAC
GAATCGGCGG AGGATGTCCG CATCGTCCTG GAGCCGCGCT CCCGCACGGT CGATCCGGTG
GTGCTGATGG AGTCGCTTTT TCGGCTCACC GAGCTGGAGA GCCGCTTCTC CCTCAACATG
AACGTGCTGG TGAGCGGGCA GGTGCCGCGG GTCGTGGGCC TCGCCGAGGC GCTGCGCGAA
TGGCTCGACC ACCGCCGCAC CGTGCTCCAG CGCCGCTCCC GCCACCGCCT CGCGCAGATC
GAGAAGCGGC TGGAGATCCT GGGCGGCCTG CTCATCGTCT ATCTCGACCT CGACCAGGTG
ATCCGCATCA TCCGCGAGGA GGACGAGCCG AAGGCCGAGC TGATGCGCTA CTTCCAGCTC
ACGGAGGTGC AGGCGAACGC GATCCTCGAC ACGCGGCTGC GCTCCCTGCG CAAGCTCGAG
GAGATGGAGC TGAAGCGCGA GCAGGCCGCG CTCACCGCCG AGAAGGCGGA TCTCGACGCG
CTCCTCGGCT CGGAAGCCCT GCAGTGGAAA TCCATCGCCG CGCAGGTGCG GGCGGTGAAG
AAGACTTTTG GGCCGGAGAC GCCGCTCGGC CGCCGCCGCA CGACGCTGGA GAACCCGCCC
GACACCTCCG ACCTCGATCT CGCCGAGGCG ATGATCGAGC GCGAGCCGAT CACCGTGATC
GTGTCGCAGA AGGGCTGGAT CCGGTCGCTC AAGGGCCATG TCGCCGACCT GTCGGGCGTG
CAGTTCAAGG GCGACGACGC CCTCAAGCTC AGTTTCCCGA CCGAGACGAC GGCGAAGCTG
CTCGTGCTCG CCTCGAACGG CAAGGTCTTC ACGCTCGACG CCGCCAAGCT CCCGGGCGGA
CGCGGCTTCG GCGATCCGAT ACGCCTGATG GCCGATCTCG ACGAGGGCAC CGACATCGTG
ACGGTCTGGC CCTACCGGGC GGGCGCCAAG CTCCTGTTCG GCACGATCGA CGGGCGCGGC
TTCACGACGG GCTCGGACGG CCTCGTGGCG AATACCCGCA AGGGCAAGCA GGTCGTGGCG
CTCGACGGGG CCGCGGTGGT CACGCATTGC GTCGAGGTGG GGGAGGGCGA CCACGTCGCG
GCCTGCGGCG AGAACCGCCT GCTCGTGGTG TTCCCGCTCA CCGAGATCCC CGAGATGGCC
CGCGGCAAGG GCGTGCGGCT GCAGCGCTAT CGCGAGAGCA CGCTCGCCTA CCTGACCGTG
TTCAAGCTGG CGGAGGGGCT GACCTGGCCC GACAGCGCCG GCCGCACGCG GAGTGTGGTG
GGCGAGGAAC TGGCCAAGTG GGTCGGCCAC CGCGGCACGG TGGGGATCAT GGCGCCGCGG
GGATTCCCGC GCAGCAACCG GCCGTAG
 
Protein sequence
MGKPFEPPSD HGGIESVELK AALEERYLAY ALSTIMHRAL PDARDGLKPV HRRILYGMRL 
LRLDPNTAFK KCAKIVGDVM GDFHPHGDQA IYDALVRLSQ DFAQRYPLVD GQGNFGNIDG
DGPAAYRYTE ARLTEVARLL LDGIDEDAVD FRPSYNGEKD EPVVLPGAFP NLLANGSQGI
AVGMATSIPP HNAAELCDAA LYLITHPTAT SEQLTSFVKG PDFPTGGIVV DSAEAIAEAY
RTGRGAFRVR ARWTREDLGR GAWNVVVTEI PYGVPKARLI EKMAELLTER KLPLLADVRD
ESAEDVRIVL EPRSRTVDPV VLMESLFRLT ELESRFSLNM NVLVSGQVPR VVGLAEALRE
WLDHRRTVLQ RRSRHRLAQI EKRLEILGGL LIVYLDLDQV IRIIREEDEP KAELMRYFQL
TEVQANAILD TRLRSLRKLE EMELKREQAA LTAEKADLDA LLGSEALQWK SIAAQVRAVK
KTFGPETPLG RRRTTLENPP DTSDLDLAEA MIEREPITVI VSQKGWIRSL KGHVADLSGV
QFKGDDALKL SFPTETTAKL LVLASNGKVF TLDAAKLPGG RGFGDPIRLM ADLDEGTDIV
TVWPYRAGAK LLFGTIDGRG FTTGSDGLVA NTRKGKQVVA LDGAAVVTHC VEVGEGDHVA
ACGENRLLVV FPLTEIPEMA RGKGVRLQRY RESTLAYLTV FKLAEGLTWP DSAGRTRSVV
GEELAKWVGH RGTVGIMAPR GFPRSNRP