| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mnod_3129 |
|---|
| Symbol | |
|---|
| ID | 7305264 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium nodulans ORS 2060 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011894 |
|---|
| Strand | - |
|---|
| Start bp | 3229755 |
|---|
| End bp | 3231551 |
|---|
| Gene Length | 1797 bp |
|---|
| Protein Length | 598 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 643600818 |
|---|
| Product | RNA-directed DNA polymerase (Reverse transcriptase) |
|---|
| Protein accession | YP_002498363 |
|---|
| Protein GI | 220923061 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0115995 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCCC AGCCCGGCGC GCTGACCCGC CAGCAACTCT ACGATCGCAT TCGCGAGACC
TCGAAGGACG AGGTGATCCT CGAGGAGATG ATCCGCCTCG GCTTCTGGCC GCAGGGGGAG
ACGCAACCGA GCCCGCCTGA GGAGCTGATC CGCCGGCGCG GCGAGATCGC GCGCGAGCTC
GCCGCTCTGC ACACCGCGGA GGCGCGCTGG CGCGATCCGG AGGCGGCGCT GAAGGAGATG
CACAAGCGCC GCAAGAAGGC GGCGCTGGAG CGGCGCAAGG AGACGAAGCG GCGCGGCGCC
GAGCAGCGCC ACGCGCGCGC CCTCGCCTGG CACGAGCGCC GGGCGGAGGA ACTCGTCTTT
CTCGGCGACG GCGTTTCCGC GGGCCTTCGC GCCGACGCTG CCGCCCCACC CGCGCCGAGG
CCCGGCCTGC CGGTCCTCGC CACGCCGAAA GCCCTCGCGG ACGCCATCGG CATCCCGCTC
GCGGAGCTTC GCTTCCTCGC CTATGACCGC GCGCTCTCCC GGATCAGCCA CTACTGGCGC
TTCACGATCC CGAAGAAGGC CGGCGGGGTT CGCCTGATCT CCGCGCCCAT GCCGCGGCTG
AAGCGCGCGC AGTACTGGAT CCTCGACAAC CTCTTGGCGC ATGCCCCGGT CCACGACGCC
GCGCACGGCT TCGTGCCCGG CCGGTCGATC GTGACCAACG CCGCCGCCCA TGTGGGCCGT
GCCGTGGTGG TGAATCTCGA CCTGAAGGAT TTTTTCCCGA CCCTGAGCTT CCGCAGGGTG
AAGGGCAAGT TCCGCGGCCT CGGCTATGCG GAGCCGGTCG CCACCGTGCT CGCGCTGCTC
TGCACCGAGC CGGACGTGGA CGAGGTGGAG ATCGACGGCG AGCGCCTGTT CGCGGCGCGC
GGTCCGCGCC GGCTGCCCCA GGGGGCGCCC ACGAGCCCGC TCTTCACGAA CCTGATCTGC
GCCCGGCTCG ACGCGCGGCT CTCGGGCCTC GCGCGCTCCA TGGGCTTCAC CTACACCCGC
TATGCCGACG ACCTGACCTT CTCCGGGGCG GCGGCCGAGA AGATCGGCGC ACTCATCGGC
CTCGTCGGTG AGATCGTCGC GGCGGAAGGT TTCGTCGTCC ATCCCGACAA GACGCGGATC
ATGCGCCGCG GCAGCCGGCA GGAGGTGACG GGCCTCACGG TGAACGAGCG CGTCGCGGTG
CCGCGCGACG TGCTGCGGCG CTTCCGCGCG CTGCTGCACC AGATCGAGGC GACGGGCCCT
GCCGGCAAAA GCTGGGGCCA GACCCGCGAC GTGATGGCGG CCGCGCGCGG CTTCGCGTGC
TTCGTCCGCA TGGTGACGCC CGAGGCCGGG GAGCCTCTGG TCGCAACGGT CCGGCGGCTG
GGCGAACGGC ACGGCCTTAC CGGCACGGCT CCCGCACCCG CCGCGTTCCG CGCGAAGGCC
GCGGCCGGCG AGCCGCCGCT GGCCCGCTGG TGGATTCCGG CCGCGCCGCC GGCGCCCGAA
CCGGAGGCGG TCCTGCGCGA GCCGGCGCCG CCTCAACCGG CCAAGCCGAT GCGGAGCGCT
CTCGACCTCG CCAGTCTGCG CGCCGACCTC CGCGACCGCG CCGCGCCCCC CGCCGGGCCT
GCCCAGGATC CGGGCGAACC GGCCATGAAG CCGTGGGTCG CCGTAATCGG CGTCCTCGTG
CTCTGGAGTG CCGCCTCCGC CATCAACCCG GCGCTTGGCA CGATCGTGCT GATCGCCGCT
ATCGTCATCG CCACGCGCTG GCTCATCCGC CGCTGGCGGA GGCGACGCCG GCGCTAG
|
|---|
| Protein sequence | MTAQPGALTR QQLYDRIRET SKDEVILEEM IRLGFWPQGE TQPSPPEELI RRRGEIAREL
AALHTAEARW RDPEAALKEM HKRRKKAALE RRKETKRRGA EQRHARALAW HERRAEELVF
LGDGVSAGLR ADAAAPPAPR PGLPVLATPK ALADAIGIPL AELRFLAYDR ALSRISHYWR
FTIPKKAGGV RLISAPMPRL KRAQYWILDN LLAHAPVHDA AHGFVPGRSI VTNAAAHVGR
AVVVNLDLKD FFPTLSFRRV KGKFRGLGYA EPVATVLALL CTEPDVDEVE IDGERLFAAR
GPRRLPQGAP TSPLFTNLIC ARLDARLSGL ARSMGFTYTR YADDLTFSGA AAEKIGALIG
LVGEIVAAEG FVVHPDKTRI MRRGSRQEVT GLTVNERVAV PRDVLRRFRA LLHQIEATGP
AGKSWGQTRD VMAAARGFAC FVRMVTPEAG EPLVATVRRL GERHGLTGTA PAPAAFRAKA
AAGEPPLARW WIPAAPPAPE PEAVLREPAP PQPAKPMRSA LDLASLRADL RDRAAPPAGP
AQDPGEPAMK PWVAVIGVLV LWSAASAINP ALGTIVLIAA IVIATRWLIR RWRRRRRR
|
|---|
| |