Gene Mnod_3117 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMnod_3117 
Symbol 
ID7304044 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium nodulans ORS 2060 
KingdomBacteria 
Replicon accessionNC_011894 
Strand
Start bp3217344 
End bp3218264 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content70% 
IMG OID643600808 
Producttranscriptional regulator, LysR family 
Protein accessionYP_002498353 
Protein GI220923051 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACCTGC GTCACCTGCG GTACTTCGTC GTGCTGGCCG AACAGCGGCA TTTCGGGCGC 
GCAGCGGAGT TGCTGAACAT GGCGCAGCCG CCCCTCTCGC AGCAGATCAA GGCGCTGGAG
GACGAGCTGG AGGTGACGCT CTTCGATCGG AGCACGCGAC CGATCGAACT CACCGCCGCC
GGCCGGACGC TCCTGCGCGA GGCGCGTCAG ATCCTCCATC ATGTCAGCCG GGCTCAGGCT
GCCACGCGCC GGGCCGGCCA GGGGCAGGAC GGGCATCTCG TCATCGGCGT CACGGGCTCG
GCCGCGATGG AGTTCCTGCC GCCTGTCCTG CTCGCCTTCC GGGCGCGTTG GCCCGACATC
CGCCTCTCGT TGCGCGAGAT GTCCTCGCCC GAGCAGATCG CGGCGCTGGA GCGTGGGGAG
ATCCATATCG GCTTCGTCCG GCCGCCCGTC CTCGATGATC GGCTGAACGT CCGCCTCGTC
CACCAAGACC CCTTCGTCGT GGCGCTTCCT GGCGATCACC CGCAAGCCGG TGTCGAGGGC
GTGAGGCTCG CCGACCTCAA CGGCACCGCT CTCATCATCT TCGATCCGGC CGAGGCGCCT
GGATTCCGTG ACCTCATCAT CCATGTCTGC CGCACGGCCG GCTACGTCCC CGAGACGCTC
GAATCGGCGC CCCAGATGAC CACGATGCTG GCGCTCGTCT CGGCCGGCCT CGGCTTCGCT
CTGGTGCCGC GGTCGGCCCG GCGCCTTGCC CTCGAACGGG TGGTGTTCCG GCCCCTCCTC
GATCCCTGCG CCGCCGTCGA GCTCTACGCC GTCTGGTCGC GCGACAAGGC AGTCCGCCTC
GCCGAGGAGC TGGTCTCCGT CATCGACGAG GCCCGGTACG CGGCGCCCGG CCCATCCGTC
CCCGCCGACG AGGGGCGCTG A
 
Protein sequence
MDLRHLRYFV VLAEQRHFGR AAELLNMAQP PLSQQIKALE DELEVTLFDR STRPIELTAA 
GRTLLREARQ ILHHVSRAQA ATRRAGQGQD GHLVIGVTGS AAMEFLPPVL LAFRARWPDI
RLSLREMSSP EQIAALERGE IHIGFVRPPV LDDRLNVRLV HQDPFVVALP GDHPQAGVEG
VRLADLNGTA LIIFDPAEAP GFRDLIIHVC RTAGYVPETL ESAPQMTTML ALVSAGLGFA
LVPRSARRLA LERVVFRPLL DPCAAVELYA VWSRDKAVRL AEELVSVIDE ARYAAPGPSV
PADEGR