| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mnod_3067 |
|---|
| Symbol | |
|---|
| ID | 7303994 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium nodulans ORS 2060 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011894 |
|---|
| Strand | + |
|---|
| Start bp | 3166683 |
|---|
| End bp | 3167840 |
|---|
| Gene Length | 1158 bp |
|---|
| Protein Length | 385 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 643600766 |
|---|
| Product | O-succinylhomoserine (thiol)-lyase |
|---|
| Protein accession | YP_002498311 |
|---|
| Protein GI | 220923009 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases |
|---|
| TIGRFAM ID | [TIGR02080] O-succinylhomoserine (thiol)-lyase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0408285 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGCACATC GGAAGGCCGC ACAGACGATC GCCGCCGCGA ACGGCATTGG CTCGGATACT
GCCTATGGGG CCGTCAGCCC GCCGCTCTAC CTCTCGACGA CCTACGCGTT CGAGGGCTTC
GAGCGCCCGC GGGCGCACGA CTATTCGCGG CTCGGCAACC CGACCCGCGA CCAGCTCGCC
GACACCATCG CCAAGCTGGA GGGCGGCGCG CACGCCGTGG TGGTGGCGAG CGGCATGGCG
GCCCTGGACC TCGCGCTCTC GCCCGTTGCG CCCGGCGACC TGCTGGTCGC CCCGCACGAC
TGCTACGGGG GCACCCACCG CCTCCTGAGC CAGCGCAGCG CGAAGGGGCA CTACCGCGTC
GCCTTCGTGG ACCAGACCGA CGAGAACGCT CTCGCGGCCG CCCTGGTGGA GCGGCCCCGC
CTCGTCCTGA TCGAGACGCC GAGCAACCCG CTGATGCGGA TTGTGGACAT CCGCCGCGTG
GCCGCGCGGG CCAAGGCCGT CGGCGCCCTG CTCGTCGTCG ACAACACGTT CCTGTCTCCC
GCCCTGCAAC AGCCGATCTC GCTCGGGGCG GACCTCGTCG TCCACTCCAC CACGAAATTC
CTCAACGGCC ATTCGGACGT GATCGGCGGG GCGGTAGTGG CCGCGGATGC TAAGCTTGGC
GAGGATCTTG CCGCCTGGGC GAACACCATC GGCGTCACCG GCTCGCCCTT CGACGCCTAC
CTGACTCTGC GTGGCATTCG CACGCTGTTC GCGCGCGTGG AGCGCCAGCA GCAGAGCGCA
GCGGCCATCG CGGCATTCCT GGCGGCGCAC CCGGCGGTGG CGCGCGTCCA CTACCCTGGT
TTGCCCGAGC ACCCGGGACA CGCGATCGCG AAGGCGCAGC AGAGCGGCTT CGGCGCGATG
CTGAGCTTCG AACTCGCGGG CGGGCGCGAG GCCATCCGCG CCGTTGTCGA GCGGCTGCGG
GTCTTCACCC TGGCGGAATC GCTTGGCGGG ATCGAGAGCC TGATCGCTCA CCCGGTGAGC
ATGACTCACG CGGCCATGGA TCCCGAGGCG CGCCGGAGGG CCGGCGTGGG CGATGGCCTC
TTGCGGCTGT CGGTCGGGCT TGAGGCCGAG GAGGACCTGC TGGACGACCT CGCGCAGGCC
CTCGACGCCG CGCGCTGA
|
|---|
| Protein sequence | MAHRKAAQTI AAANGIGSDT AYGAVSPPLY LSTTYAFEGF ERPRAHDYSR LGNPTRDQLA
DTIAKLEGGA HAVVVASGMA ALDLALSPVA PGDLLVAPHD CYGGTHRLLS QRSAKGHYRV
AFVDQTDENA LAAALVERPR LVLIETPSNP LMRIVDIRRV AARAKAVGAL LVVDNTFLSP
ALQQPISLGA DLVVHSTTKF LNGHSDVIGG AVVAADAKLG EDLAAWANTI GVTGSPFDAY
LTLRGIRTLF ARVERQQQSA AAIAAFLAAH PAVARVHYPG LPEHPGHAIA KAQQSGFGAM
LSFELAGGRE AIRAVVERLR VFTLAESLGG IESLIAHPVS MTHAAMDPEA RRRAGVGDGL
LRLSVGLEAE EDLLDDLAQA LDAAR
|
|---|
| |