Gene Mnod_3061 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMnod_3061 
Symbol 
ID7303988 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium nodulans ORS 2060 
KingdomBacteria 
Replicon accessionNC_011894 
Strand
Start bp3161289 
End bp3162719 
Gene Length1431 bp 
Protein Length476 aa 
Translation table11 
GC content71% 
IMG OID643600760 
Productisopropylmalate isomerase large subunit 
Protein accessionYP_002498305 
Protein GI220923003 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0065] 3-isopropylmalate dehydratase large subunit 
TIGRFAM ID[TIGR00170] 3-isopropylmalate dehydratase, large subunit 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCACCCC GTACCCTCTA CGATAAGCTG ATCGACTCCC ATACGATTAC CCGCCTCGAT 
GACCGCGACG GCCCGGGCGC TGAAGTTCTG CTGTACATCG ACCGCACTGT CCTCAACGAG
TACACGAGTC CGCAAGCCTT CAGCGGCCTG CGCGAGGCGG GCCGCCAGGT CTGGCGGCCG
GGCGCTGCGC TCGCCGTCGT CGACCACGTC AATCCGACCG CGCCTCACCG CGGCGCCGCG
ATGCCGGACG AGGGCGGCGC CCGGCAGGTG CGCTACTTCG GCGAGAACTG CCGCGACTTC
GGCATCGAAC TCTTCGACGT GCTGCACCCG CTCCAGGGCA TCGAGCACGT GGTCGCACCG
GAGCTCGGCT TTATCTTGCC CGGCATGGTC GTGGGAGCAG GCGACAGCCA CACCACTACC
TACGGCGCGC TGGGCGCGCT CGGCTTCGGC ATCGGCACCT CGGACATCGA GCACTACCTC
GCCACACAGA CGCTCCGCTA CCGCCGGACG CGCACGATGC GGGTGACGCT CGAGGGTGCC
CTGCCGCCAA GCGTGACGCC CAAGGACGTG GTGATGGCCC TGATTCGCAG GATCGGCGCC
TCGGGGGCGA CGGGCTACGC GGTGGAATTC GCCGGCGACG GCCTCACGGC GCTCCCGGTC
GAGGGCCGGA TGACGATCTG CAACATGGCC GTCGAGGGCG GCGCGCGCGG CGTGATCATG
GCGCCCGACG CCGCGGTGTT CGACTATCTC GCCGACAAGC CTCGCGCGCC AAAGGGTGCC
GCATGGGAGG CCGCCGTGCG ACACTGGTCG ACGCTCCGCA GCGACCCGGA CGCGGTGTTC
GATCGCGAGA TGCGCCTCAA GGCGTCGGAG ATCGAGCCGC TGGTCACCTG GGGCATCAGC
CCGGACCAGG CGATGCCGAT CGGCGGCCGC GTCCCCGATC CCGCCTCGGA GCCGGACGCG
AACCGTCGCC GGGACATGGC GCACGCACTC GCCTATATGG ACCTCGCCCC CGGCACGGCC
CTGGAAGCCG TGCCGATCCA GCGCGCCTTC ATCGGGTCCT GCACCAACGC CCGCCTCTCC
GACCTGCGCG AGGCCGCGGG CGTGCTGCGG GGCCGGCGCA TCGCCGAGGG CGTGCGCGGC
ATGGTGGTGC CCGGCTCCTC CAGCGTGCGT CGCGCCGCCG AGGCCGAGGG TCTCGACCGC
GTCTTCATCG AGGCCGGGTT CGAGTGGCGT CAGTCGGGCT GCTCGCTCTG CCTTGCCATG
AACGACGATG TGCTGGCACC CGGCGAGCGC TGTGCATCAA GCACCAACCG CAACTTCGAG
GGTCGCCAAG GCGCCGGCGG GCGCACCCAC CTGATGAGCC CCGCCATGGT CGCGGCGGCC
GCGGTCACCG GCCACCTGAC TGACGTACGC CGCCTCACCC GGGAGAACTG A
 
Protein sequence
MSPRTLYDKL IDSHTITRLD DRDGPGAEVL LYIDRTVLNE YTSPQAFSGL REAGRQVWRP 
GAALAVVDHV NPTAPHRGAA MPDEGGARQV RYFGENCRDF GIELFDVLHP LQGIEHVVAP
ELGFILPGMV VGAGDSHTTT YGALGALGFG IGTSDIEHYL ATQTLRYRRT RTMRVTLEGA
LPPSVTPKDV VMALIRRIGA SGATGYAVEF AGDGLTALPV EGRMTICNMA VEGGARGVIM
APDAAVFDYL ADKPRAPKGA AWEAAVRHWS TLRSDPDAVF DREMRLKASE IEPLVTWGIS
PDQAMPIGGR VPDPASEPDA NRRRDMAHAL AYMDLAPGTA LEAVPIQRAF IGSCTNARLS
DLREAAGVLR GRRIAEGVRG MVVPGSSSVR RAAEAEGLDR VFIEAGFEWR QSGCSLCLAM
NDDVLAPGER CASSTNRNFE GRQGAGGRTH LMSPAMVAAA AVTGHLTDVR RLTREN