| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mnod_2561 |
|---|
| Symbol | |
|---|
| ID | 7305095 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium nodulans ORS 2060 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011894 |
|---|
| Strand | - |
|---|
| Start bp | 2647852 |
|---|
| End bp | 2648358 |
|---|
| Gene Length | 507 bp |
|---|
| Protein Length | 168 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 643600281 |
|---|
| Product | peptidase A24A prepilin type IV |
|---|
| Protein accession | YP_002497828 |
|---|
| Protein GI | 220922526 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG4960] Flp pilus assembly protein, protease CpaA |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAGCTTC TTTCCCTGGT TTTCCCGGCG ATCATGGCCT ATGCGGCAGC CAGCGATCTC
CTCACCATGA GGATCCCGAA CTTCATTTCG GTGGCTCTCA TCGTCATTTT TTTCGGACTG
GCGATCCTCG TGGGCGTGGA TTGGAGTACC GTGGCATGGC ATGCGGCCGC CGGGGCGACG
ATGCTCGTCG TCTGCTTCCT CATGTATGCG CTCGGCTGGA TCGGGGGCGG CGACGCCAAG
CTCGCCGCAG CGACCGTGCT CTGGCTTGGC TTCACGCCCG TGTTGTTGGA TTACCTGCTC
ATTGTCGGCC TCGTGGGCGG GATGATGGGA GTGCTGTTTC TGTCGATCCG TCGCTTCCCC
CTTCCAGCTT TCGCACTCAC GTGGGAATGG CTGGTGCGGC TCCATGACAA GAAGGCCGGT
GTTCCGTACG GTATTGCATT GGCGGCAGCT GGTCTGGCGG TCTACCCGGA TTCTCTCCTG
TCGCTGAAGC TCCTAGGCAC AGTGTAA
|
|---|
| Protein sequence | MQLLSLVFPA IMAYAAASDL LTMRIPNFIS VALIVIFFGL AILVGVDWST VAWHAAAGAT
MLVVCFLMYA LGWIGGGDAK LAAATVLWLG FTPVLLDYLL IVGLVGGMMG VLFLSIRRFP
LPAFALTWEW LVRLHDKKAG VPYGIALAAA GLAVYPDSLL SLKLLGTV
|
|---|
| |