Gene Mnod_2550 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMnod_2550 
Symbol 
ID7305084 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium nodulans ORS 2060 
KingdomBacteria 
Replicon accessionNC_011894 
Strand
Start bp2636539 
End bp2637660 
Gene Length1122 bp 
Protein Length373 aa 
Translation table11 
GC content63% 
IMG OID643600271 
Productmultidrug resistance efflux pump-like protein 
Protein accessionYP_002497818 
Protein GI220922516 
COG category[V] Defense mechanisms 
COG ID[COG1566] Multidrug resistance efflux pump 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTGCTG AACTGAAGGC GAGCCGGGTT GGCTGGGGCA AGCTGTTCCG GGTGTTCCTG 
GTCGGCACCA CCGTGATCGG CGGTGGCGCG GCAGGAACCT ACTATTACTC GAATGGTGGT
CTGGTGCTGA GCGCAGACGG CTTGGTCACC CGCGACCGAG TCTACGTGGC GACGCCCTAT
GACGCGCGGG TGCGCGAGGT GTTCGTTCGC CCCGGCGACT CGGTCTTCGC CGGCCAGAAG
GTGGCCGTCG TCGACTCGCC GTCGATCTCG AAGTCCCTCG CGGAGTTCTC CGTCGAGCGC
GCGAAGATCT CCTCACGCAT TGCTCAACTC GAAGCTCGCA AGGCAATCGT TGCTGCCATG
GTGCCGATCG CTCAGGTCGG CGCGAAGCAG GCCAACGAGT TCATGGCCGA CTTGAACAAG
GCCAAGATCT CGGGCCTTGC GCTCAATCGC TCGCTGCACG AGGTCACCGC GGCCTCGTTC
ACCGCGACCG AGCGGCTGAT GACCATCACG TCGGAAAAAA CCTCGCTTGA CACGGAACTG
GCGTCGAACC GGGCGGCGCT CGCCGAGATA ACGGCTGCTT CTGAGAACTT GCGCAAGGTT
TATGCGGAGG GCGTGCTGAC CGCCCCGGTG TCGGGTGTGA TCGGCAGCGC CATCGCCAAT
CCCGGAGAGG TCCTCACACC GGGCTCGAAC CGGCTGGCCT CCATCTACAC CGGCACAAGT
TTCGTGCTCG CCTACATGCC GGAAAGCTAC CTCTTCGACG TGTCCGAGGG CCAGCCGGTG
CAGGTCTCGG CGCACCACCA GAGCGTACCG GGCCAGATCG CCCGGATCCT GCCGGTCACC
GACGCGCTGC CACCGGAATT CCAGCCTCCA AACAAGGCGC GCGACCGCGG ACAGGTGGTA
AAAATCTCGC TGAACGATGC TAATCGCTTT GCGGTCGAGC AGAAAATCCG CGTATCGAGC
TGCATCGTCA CAGGATGCAA GGACAGCTAC GTCGAGCAAG CCAAGTCTCG GGTAATCGTC
ACGCTGAGCA ATCTGTTTTC CAGCCCAGCC CAAGCCCAAC GGATTGACCG CGAAGCTAGA
GTGACGAAAA AGGGGGCGAT GCGTGTCGGA CCAGATTTAT GA
 
Protein sequence
MSAELKASRV GWGKLFRVFL VGTTVIGGGA AGTYYYSNGG LVLSADGLVT RDRVYVATPY 
DARVREVFVR PGDSVFAGQK VAVVDSPSIS KSLAEFSVER AKISSRIAQL EARKAIVAAM
VPIAQVGAKQ ANEFMADLNK AKISGLALNR SLHEVTAASF TATERLMTIT SEKTSLDTEL
ASNRAALAEI TAASENLRKV YAEGVLTAPV SGVIGSAIAN PGEVLTPGSN RLASIYTGTS
FVLAYMPESY LFDVSEGQPV QVSAHHQSVP GQIARILPVT DALPPEFQPP NKARDRGQVV
KISLNDANRF AVEQKIRVSS CIVTGCKDSY VEQAKSRVIV TLSNLFSSPA QAQRIDREAR
VTKKGAMRVG PDL