Gene Mnod_2540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMnod_2540 
Symbol 
ID7303329 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium nodulans ORS 2060 
KingdomBacteria 
Replicon accessionNC_011894 
Strand
Start bp2610436 
End bp2612865 
Gene Length2430 bp 
Protein Length809 aa 
Translation table11 
GC content65% 
IMG OID643600262 
Productmulti-sensor signal transduction histidine kinase 
Protein accessionYP_002497809 
Protein GI220922507 
COG category[T] Signal transduction mechanisms 
COG ID[COG2202] FOG: PAS/PAC domain
[COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCGGCT TGAGGAGCAC ACAATACGGC CTGGCTGTTC TCGCCACGAC GGGCGCGTTT 
CTGCTGCGCC TCGGTCTTGA TCCGGTTCTC GGTGACCGCT CGCCCTTCCT GCTCTTCACG
CTTCCCATCC TCGTCACGGC GCTCAGCGCA GGAACCCGGC CGGCCCTTGT CGCGGCCGTC
CTGGGCGGCC TGTCCGGCAC CTACGCGTTC GTTCCGCCGA ACCCGTCACT GCGCCTCGTG
ACCCCGGGCG ACTGGCTTGA GGTGGCCCTT TTCTCGATCA CGGCAGCGCT GATCATCCGG
GTCGTGAATC GGCGGGCGGC CCTGCGCGCG CAGCACAACC AGGCCGTGGA GGAGCTGCGC
ACCAGCGAGG CAATCAAGGC TGCTATCCTG CGCGGCGCGC TCGACGGGAT CGTCACGACG
ACTGAGGACG GACGCATCCT TGCCGCCAAC CCGGCCTTCT GCCGGGCCTT CGGATTTCGG
GCCGAGGACG CCGTCGGGCG TCGGCTCACG GACCTCCTCG TCGTACCTGC CCCCTCTCTC
CTTCCCGGGA CCTCACCGGA GCGCGTCGTT GCCGCGCTCC CCGGCATCCG ACCGGACCAT
CGCGTCGAGG GCGAAGCCCT CCGGTCGGAC CGGTCGCGGT TTCCGGCGGA GATCGCCATG
ACTTTCACGC GGCATCAGAC GCACAACCAG CTCACCTGGT TCATCCGCGA CGTCACGGAG
CGCAAAGCGT TCGAAGACGC GCTGCGCCGG ACGACACGGC AGCTGACCGT CGTGCTCGAA
AACGCCTCCG AGTCGATCTT CCTGCTCGAT GAGCAAGGCT GCTGCGTCTA CATGAACCCC
TCGGCGGAGA GCCTGACCGG TTTCACGCTC GCGGAGGCCA GCGGCCGGAG CCTGCACGCC
CTCATCCACC ACATCGGCCC GGACGGCAGC CCCTGCCCGG AAGCGGATTG CGCGATCGCC
TGCGCCAGTC GCGGACAGAC CAAGCGCTCC GGACAGGAGG TCCTGATCCG CCGCAACGGC
GACTTCGTTC CAGTCTCCTA CATCGCGAGC CCGATCCGGG ACTCCAGCCA TGCGGTGATC
GGCGCCGTCA TCGAGATCCG CGATGTCACC GAGGAGCGCC GGCGGGACGC CTTATTGGAC
GAGAACCGCC GGCAGTTGCT GCGGCAGCAA CAGGCCCTCG AAACGCTGCA CCGGCTCGGC
ATCACGATCG CGGCCGAGCT CCACCCCGAT CGCTTGGTTC AGACCGTGGT GGATGCGGGC
GTCACCCTGA GCGGGGCCCA GGTCGGAGCG TTCTTCTACA ATGCCACCAA CGACACGGGC
GACCATTACG TCCTCTATGC GCTCGCTGGC GCCGAGCGCA GCGCCTTCGA CCGCTTCGGC
CTGCCGCGGG CCACCCCGCT CTTTGGGCCG ACCTTCCGCG GCGATGGGGT GATTCGCTCC
TCCGACATCC TCCAGGACCC ACGCTACGGG AAAAATGCGC CCCATGCGGG CATGCCCGAA
GGCCACATTC CCGTACGCAG CTATCTCTCG GTGCCCGTGG CGTCGCGCGA TGGCAACGTC
ATCGGGGCGC TCTTCTTCGG ACACGCGGAA CCCGACATCT TCGATGAGGC CGCGGAGCGC
GCCGTGATCG GGCTTGCCGC TCACGCCGCC ATCGGCCTCG ACAACGCACG GCTCTTCGAG
GCTGTCGAGA AGGCGAAGCA AACGCTCGAA GAGAAGGTCA GGACGAGAAC GCAGGCTCTC
GAGGAGATCA ATGCGGAGCT CGACGCCTTC AGTTATACGG TGAGTCATGA TCTGCGCGCA
CCTTTGCGTG CTGTTCAGAC GCTCGCATCC ATTCTGCTCG ACGACTTTGG GGAGCGCTTG
GGCGAGACCG GGCGACAATA CGCCGAGCGG ATCGTGGGTG CGGCGCAACG CATGGACGAC
CTCGTGCAGG GGCTCCTGCA ATATAGCAGG CTGGCGAGAA CTGACATTCA GCTCCAGCCG
ATCAGCCTGC GCTTCGTCAT GGAGAAGGTC AGGCAAACGC TGGAGCGCAA CGAAGAGCTT
GACGATGCCG TCCTGGATCT CTCAGAGAAC CTGCACACGG TGTACGCGAA TCCGACAATC
CTGCAGCAGG TTCTTCACAA TCTCGTAACG AACGCCATCA AATACCGCCA CGAGGAGCGT
CCCGCCCGTG TTAAGGCCTG GTCGGAACTG AGGAACGATC GCGTCGTGCG CATCTGGATC
GAAGACAACG GAATAGGTGT TGCACCCGAC CAGCTGGACA AGATCTTCGA TGTCTTCTAT
CGGGCACCGG GCACCATGTC TCGGCCTGGT ACGGGCATCG GACTTGCTGT CGTCAAGAAG
GGAACGGAAC GCATGGACGG ACGGTGCGGA GTCGAGTCCC GTGACGGCGA GGGTAGCCGC
TTCTGGATCG AGTTGCCGAC CCCGAACTGA
 
Protein sequence
MLGLRSTQYG LAVLATTGAF LLRLGLDPVL GDRSPFLLFT LPILVTALSA GTRPALVAAV 
LGGLSGTYAF VPPNPSLRLV TPGDWLEVAL FSITAALIIR VVNRRAALRA QHNQAVEELR
TSEAIKAAIL RGALDGIVTT TEDGRILAAN PAFCRAFGFR AEDAVGRRLT DLLVVPAPSL
LPGTSPERVV AALPGIRPDH RVEGEALRSD RSRFPAEIAM TFTRHQTHNQ LTWFIRDVTE
RKAFEDALRR TTRQLTVVLE NASESIFLLD EQGCCVYMNP SAESLTGFTL AEASGRSLHA
LIHHIGPDGS PCPEADCAIA CASRGQTKRS GQEVLIRRNG DFVPVSYIAS PIRDSSHAVI
GAVIEIRDVT EERRRDALLD ENRRQLLRQQ QALETLHRLG ITIAAELHPD RLVQTVVDAG
VTLSGAQVGA FFYNATNDTG DHYVLYALAG AERSAFDRFG LPRATPLFGP TFRGDGVIRS
SDILQDPRYG KNAPHAGMPE GHIPVRSYLS VPVASRDGNV IGALFFGHAE PDIFDEAAER
AVIGLAAHAA IGLDNARLFE AVEKAKQTLE EKVRTRTQAL EEINAELDAF SYTVSHDLRA
PLRAVQTLAS ILLDDFGERL GETGRQYAER IVGAAQRMDD LVQGLLQYSR LARTDIQLQP
ISLRFVMEKV RQTLERNEEL DDAVLDLSEN LHTVYANPTI LQQVLHNLVT NAIKYRHEER
PARVKAWSEL RNDRVVRIWI EDNGIGVAPD QLDKIFDVFY RAPGTMSRPG TGIGLAVVKK
GTERMDGRCG VESRDGEGSR FWIELPTPN