| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mnod_1778 |
|---|
| Symbol | |
|---|
| ID | 7302392 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium nodulans ORS 2060 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011894 |
|---|
| Strand | + |
|---|
| Start bp | 1873478 |
|---|
| End bp | 1876069 |
|---|
| Gene Length | 2592 bp |
|---|
| Protein Length | 863 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 643599513 |
|---|
| Product | protein of unknown function DUF214 |
|---|
| Protein accession | YP_002497071 |
|---|
| Protein GI | 220921770 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG3127] Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCACGGCA GCCTGCCCCC CCTGAGTGCT CCGGGTCCGC GACGCCCGGC GAACCGCCCG
CGTCTTCCCC TCACGCTTCG CCTCGCCCTG CGGGAGCTGC GCGGGGGCCT GCGGGGTTTT
GCGGTGTTCC TCGCCTGCCT GGCGATCGGC GTCGCGGCGA TCGCCGGCGT ATCCTCCGTC
TCGCGCTCCC TCACCGACGG GCTCGCCCGG CAGGGGCGGA TCATCCTCGG CGGCGACGTC
GCCTTCAGCC TCATCCACCG GGAGGCGAGC CCGGCCGAGC GGGCCTTCCT GGAGGCGCGC
GGCCGCGTCT CGGTGGTCGC CTTCACCCGC GCCATGGCGG TGGCGGGCGA GAAGGGCGCG
GCCTTGGTCG AGCTGAAGGC CGTGGGTCCG GACTATCCGG CGGCGGGGGA TCTCGTCACC
GAGCCGGGCC TCGCTCGCGC CGACCTCTTC GCCGAGCGCG ACGGCGCCTT CGGGGCGGCG
GTCGATCCGG CCCTCCTCGC CCGCCTCGAT CTCAAGCTCG GCGATCGCGT CACGGTCGGG
ACCGTGCCGA TCGTGCTGCG CGCCGTGCTC CAGAGCGAGC CGGACAAGAT CGCGAACGGC
CTCGGCTTCG GCCCGCGGCT CCTCACCAGC GAGGCGGCCC TGCGCGCCTC CGGCCTGATC
CAGCCCGGCA GCCTCAACCG CTGGGTCTAC CGGGTCCAAC TCGCCGATCC GTCGGATGCG
CGGGTCGAGC AGGTGATCGC CGAGGCGAAG GCGGCGCTGC CGGAGGCCGG GTGGGAGATC
CGCTCGCGGC TCAATGCCGA TCCGCGCTTC TCCCGCAGCG TCGAGCGCTT CACCCAGTTC
CTGACCCTGG TCGGCCTCAC CGCCCTGATG GTCGGCGGCG TCGGCGTCGC GAATGCCGTG
CGCGGCTTCG TCGAGCGCAA GCGCACGTCG ATCGCGACGC TGAAGAGCCT GGGCGCCCCG
GGCGGCCGGG TGGTCGGCCT CTATCTGACG CAGGTGATGC TGATCGCCGC CCTCGGCATC
GCCATCGGCC TGTCGGTCGG GACGGCGCTG CCCTTCGCGA TCGAGGCCGC CTTCGCGGAT
CTGCTGCCGG TGCCGCTGAG CCCCACCGTG GCGCCGGGCC AGCTCCTCGT TGCGGCGCTC
TACGGGTTCC TGACCGCGCT CGCCTTCGCG ATCGGTCCGC TCGGCCGCGC GCACGACGTC
GCAGTCTCGG GCCTGTTCCG CGACACGGTC GATCCGGAGC GGCGCTGGCC GCGCCCGCGC
TACCTCGCGA TCCTCGGCCT CGCGCTCGCC GCCCTGGTGG CGCTGGCGCT TGTCACGGCC
TTCGACCGGA AGGTCGCGCT GATCTTCATC GTCGCGGCGG GGCTCGCCTT CGCGCTCTTG
CGTGGCGTGG CGCTCGGCCT GATGGCGCTC GCGCGCCGCC TGCCGCGCCC GGCCCGCGCC
GCCCCGCGGC TCGCGCTCGC CAACCTGCAC CGGCCCGGCG CGCTGACGCC CTCGATCGTG
CTCTCCCTCG GGCTCGGTAT CACGCTTCTC GTGACCTTGA GCCTCATCGA CGCGAGCATC
ACCCGCACGC TCACCCGCTC GCTGCCCGAG CGGGCGCCGA ACCTGTTCTT CCTCGACATC
CCGAGCCGGG ACGCCGCGTC CTTCGACCAG CTCCTCGGTG CCGCGGCGCC CCGCGGCAAG
ATCGAGCGCG TGCCGATGAT GCGCGGGCGC ATCACCGCCC TCAACGGCCG GCCCGCGAGC
GAGATCAAGG CGCCGGAGGA CGCCGCCTGG GTGCTCGACG GCGACCGCGG CATCACCTAC
GCGGAGGATC TGCCGGACGG CTCGCGCGTG ACCGCGGGGG CATGGTGGAC CCCCGATCAG
GCGAAGACCC CGCTCGTCTC CTTCGACGAC CAGCTCGGGC GGGCGCTCGG CCTCAAGGTC
GGCGACACCG TCACGGTCAA TGTGCTCGGC CGCAACCTCA CGGTGCCGAT CGCGAATCTG
CGCCATGTCG AGTGGCGCAA CCTCGGCATC AACTTCGTGA TGGTGTTCTC GCCCGGCACC
TTCCGGGGGG CGCCGCATGC CGACCTCGCG ACCCTGACGC TGCCGGAGGG GCCGGACCCG
GCGCTGGAGG CGCGCATCCT GCGCCAAGCC GCCCTCAGTT TCCCCTCCGT GACGAGCGTG
CGGGTGAAGG ACGCCCTTGA GGCGGTGAAC GACATCGTCG GCAAGCTCGT CTTCGCCATC
CGGGGGGCGA GCGGCGTCGC GCTCGTCGCG AGCCTGTTCG TGCTCGCGGG GGCGCTGGCG
GCGGGGCACC GCGCGAGGCT CTACGACGCC GTCGTGCTCA AGACGCTCGG CGCGACGCGG
GCGAGGCTGC TCGCCGCCTA CGCGCTGGAA TACGGGGCGC TGGGGCTCGC CACCGCGGTG
TTCGGCCTGA TCGCCGGCAC GCTGGCCGCC TGGGTGATCG TCACGCAGGT GATGCGGATC
GACTTCCTGC TCGACCTCTC GGGGGCGCTC GTCGCGGCCG CCCTCGCGGT GGCGGTGGCG
GTCGGCCTGG GGCTCGCCGG GACCTGGCGG ATCCTCGGCC ACAAGCCGGC CCCTTACTTA
CGAAATCTGT GA
|
|---|
| Protein sequence | MHGSLPPLSA PGPRRPANRP RLPLTLRLAL RELRGGLRGF AVFLACLAIG VAAIAGVSSV
SRSLTDGLAR QGRIILGGDV AFSLIHREAS PAERAFLEAR GRVSVVAFTR AMAVAGEKGA
ALVELKAVGP DYPAAGDLVT EPGLARADLF AERDGAFGAA VDPALLARLD LKLGDRVTVG
TVPIVLRAVL QSEPDKIANG LGFGPRLLTS EAALRASGLI QPGSLNRWVY RVQLADPSDA
RVEQVIAEAK AALPEAGWEI RSRLNADPRF SRSVERFTQF LTLVGLTALM VGGVGVANAV
RGFVERKRTS IATLKSLGAP GGRVVGLYLT QVMLIAALGI AIGLSVGTAL PFAIEAAFAD
LLPVPLSPTV APGQLLVAAL YGFLTALAFA IGPLGRAHDV AVSGLFRDTV DPERRWPRPR
YLAILGLALA ALVALALVTA FDRKVALIFI VAAGLAFALL RGVALGLMAL ARRLPRPARA
APRLALANLH RPGALTPSIV LSLGLGITLL VTLSLIDASI TRTLTRSLPE RAPNLFFLDI
PSRDAASFDQ LLGAAAPRGK IERVPMMRGR ITALNGRPAS EIKAPEDAAW VLDGDRGITY
AEDLPDGSRV TAGAWWTPDQ AKTPLVSFDD QLGRALGLKV GDTVTVNVLG RNLTVPIANL
RHVEWRNLGI NFVMVFSPGT FRGAPHADLA TLTLPEGPDP ALEARILRQA ALSFPSVTSV
RVKDALEAVN DIVGKLVFAI RGASGVALVA SLFVLAGALA AGHRARLYDA VVLKTLGATR
ARLLAAYALE YGALGLATAV FGLIAGTLAA WVIVTQVMRI DFLLDLSGAL VAAALAVAVA
VGLGLAGTWR ILGHKPAPYL RNL
|
|---|
| |