| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mnod_1407 |
|---|
| Symbol | |
|---|
| ID | 7308159 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium nodulans ORS 2060 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011894 |
|---|
| Strand | - |
|---|
| Start bp | 1489457 |
|---|
| End bp | 1491574 |
|---|
| Gene Length | 2118 bp |
|---|
| Protein Length | 705 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 643599148 |
|---|
| Product | TonB-dependent siderophore receptor |
|---|
| Protein accession | YP_002496709 |
|---|
| Protein GI | 220921408 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
|---|
| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCGC TCCGCTCCTC CCGCTTCTCC CTCTTCGCCC TCCTTCTCGC CGTGCCGGCC
GGCGCCGAGG AGATCCCCCT CGACATGATC GAGGTGGCCG GCCGCCTGCG CGAGGGGCCG
CCGCCCGGCC TCGCCCTCTC CGCGCCGGCC CGCTCCGGCA GCCGCCTCGG GCTGACCCCG
CTGCAGACCC CGGCGAGCCT CGACGTGATC TCGGGCGAGA CCATCCGCGC GCGCGGCCAG
ACCACCATCG CGGATGCGGT GACGCAGAAC GCCACCGGCA TCACCAGCAT CGCGCATCCC
GGCAACGGCA ATCTCTCCTT CACCAGCCGG GGCTTCGCCG GGCCGGGCTC GGTGCAGCAG
CTCTACGACG GCACGAGGCT CTATGTCGGG GCCGGCACCG TCACCTTCCC GTTCGACCCC
TGGTCGGCGG AGCGGATCGA GGTGCTGCGC GGGCCCGCCT CCGTGCTCTA CGGCGAGGGC
GCCATCGGCG GCGTGATCAA CGTGGTGCCG AAGAAGCCGG TCTTCACGCC CGTGAACGAG
GCACAGGCCG CCCTCGGCTC GGACGGAACG GCGCGGCTCG CCCTCGATTC GGGCGGGCCC
ATCGGCGAGG CGATGGCCTA TCGGCTGAAC ATCAGCGGCA ACCGCGCCGA CGGCTGGGTC
CGGCCGGACG GCGACTTCCG CAACCTCGCG CTCTCCGGCG CGGTCACCTG GCGGGCCGCG
CCCGATCTCA GCCTCACCCT GTCGCACGAC CTCGGCTACA ACGAGCCCAC CCGCTACTGG
GGCTCGCCGC TGATCGGCTC CCGCGTGCCG GAGCGCATCC GCTTCACCAA CTACAACGTC
GCCGATGCGC GCATGGCCTG GCTCGACAAC TGGACGCAGC TGCGCACGGA GTGGAGCCCG
AGCCCGGACG TCACCATCCG CAACACCGCC TACCGGCTCT CCGCCGAGCG GCACTGGCGC
GACGTCGAGC AGTACACCTT CCAGCCGGCG ACGGGGCTGA TCCGCCGCAG CGACTACATC
GAGATCCTCC ACCATCAGGA GCAGATCGGG AACCGCTTCG ACGCGACTGT CCGCGGGAGC
CTGTTCGGCC TGCCCAACAC CGTGGTGGCC GGCTTCGATG TGAACCGCAT CGCCTTCGAC
CGCGACAGCA ACGCGCCCTT CGAGGGCGTG AGCTTCGTCA ACCCCTTTCT CCCCGTGCCG
GGCTCCTTCC TCAACCTCGC CGGGACGCGC CGGGACATCA TCTCGCGGGT GAACCAAGCC
TCGGTCTTCG CCGAGGACCG GCTGGAGCTG ACGCCGCAGC TCGCGCTGAT CACGGGCGTG
CGCTTCGACG CGCCCACCGT CTCCGTCGCC CGGCCGCTCG CCGGCACCGC CTTCACCAAG
ACCTTCGAGT CCCTGAGCTA CCGGGTCGGC GCCGTCTACA ACCCCGTTCC CGACCTCGCG
CTCTATGCGC AATACGCGAC CGCGGCCGAT CCGCTCGGCA GCCTCATCAC CACCACCGTC
TCGCAGGCGC AGTTCGACCT CGCCACGGGC CGGCAGGTCG AGGTCGGCGC GAAGGGCATC
TTCGCGGGAG GCCGAGGCGA GTGGACGCTG GCCGCCTACC ACATCGCCAA GGACAACCTG
CTGGTCCCCG ATCCCGACCG GCCGGGTGAG TCGCGGCAGG TCGGCCGGCA ATCCGCGCGG
GGCGTCGAGG CGGCCCTGTC CTTCGCCCTC GACGATCACT GGCGCATCGA GGCCAACACC
GCCCTGCTCC AGGCGCGCTA CGACGCCTTC TCCGAGCGGG TGAAAGGGCA GGTGGTATCC
TACGCCGGCA ATGTTCCGAA GGACGTGCCC CAGCGCGTCA CCAATGTCTG GATCGCCTAC
GCCTTCGCGC CGGGCTGGGT GGCGCGGCTC GGCCTCAACA ATGTCGGCCC GGTCTTCAGC
GACTTCGCCA ACACCGCGCG CCGGCCCGGC TACACGCTCG TCAATGCCAG CCTCGACTGG
CAGGTGACGC CGGATTCGCG CCTGTCGCTG CGCGGCTACA ACCTCACCGA CCGGATCTAC
GCGGTCTCGG GCAACACCAA TTCCTGGCTG CTTGGGCCCC CGCGCTCGGT CGAGCTTGCC
TATCAGGTGA CGTTCTGA
|
|---|
| Protein sequence | MTALRSSRFS LFALLLAVPA GAEEIPLDMI EVAGRLREGP PPGLALSAPA RSGSRLGLTP
LQTPASLDVI SGETIRARGQ TTIADAVTQN ATGITSIAHP GNGNLSFTSR GFAGPGSVQQ
LYDGTRLYVG AGTVTFPFDP WSAERIEVLR GPASVLYGEG AIGGVINVVP KKPVFTPVNE
AQAALGSDGT ARLALDSGGP IGEAMAYRLN ISGNRADGWV RPDGDFRNLA LSGAVTWRAA
PDLSLTLSHD LGYNEPTRYW GSPLIGSRVP ERIRFTNYNV ADARMAWLDN WTQLRTEWSP
SPDVTIRNTA YRLSAERHWR DVEQYTFQPA TGLIRRSDYI EILHHQEQIG NRFDATVRGS
LFGLPNTVVA GFDVNRIAFD RDSNAPFEGV SFVNPFLPVP GSFLNLAGTR RDIISRVNQA
SVFAEDRLEL TPQLALITGV RFDAPTVSVA RPLAGTAFTK TFESLSYRVG AVYNPVPDLA
LYAQYATAAD PLGSLITTTV SQAQFDLATG RQVEVGAKGI FAGGRGEWTL AAYHIAKDNL
LVPDPDRPGE SRQVGRQSAR GVEAALSFAL DDHWRIEANT ALLQARYDAF SERVKGQVVS
YAGNVPKDVP QRVTNVWIAY AFAPGWVARL GLNNVGPVFS DFANTARRPG YTLVNASLDW
QVTPDSRLSL RGYNLTDRIY AVSGNTNSWL LGPPRSVELA YQVTF
|
|---|
| |