| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mnod_0787 |
|---|
| Symbol | |
|---|
| ID | 7306232 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium nodulans ORS 2060 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011894 |
|---|
| Strand | + |
|---|
| Start bp | 858466 |
|---|
| End bp | 859290 |
|---|
| Gene Length | 825 bp |
|---|
| Protein Length | 274 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 643598557 |
|---|
| Product | putative transmembrane anti-sigma factor |
|---|
| Protein accession | YP_002496121 |
|---|
| Protein GI | 220920820 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG5662] Predicted transmembrane transcriptional regulator (anti-sigma factor) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.353993 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGGACGG CCGCTTCCTG CGAGCCCTGC GCCGATCAGG TCCCCCTGCT GCAGGGTCTT
CTCGACGGTG AACTCGACGC GGCCAACGCG TTGCAGGCCG AGACCCATCT CCGCGACTGC
CGGGCTTGCG CCGATTATTA CGGGCGCCTG CAAGCGGGGC GGCAGCGGCG AAGACAGGAG
GGCGTGCGCC ATCGCGCACC CGACGCCCTG CGCGATCGCG TGCGGGCTGC CGTCGCGGCG
CAGGCGGCGG CGTCCCCGGC GGCCTCTCCC GTCATCACGG CAATGCCGGA TGCAGGCCCG
CAGCGGCGCC GCAGGTTCGT GGAGCGCGGG GCGATCGCCC TCGCGCTCGC GGCGTGTCTG
GCCGTGATCG CGGTTCTGCC GCGCGGCGGG GATCACGGCG GGCCGGCACT GCCCGACGAA
CTCGTCTCGG GTCACGTGCG CTCGCTCCTG GTGAGCCACC TGACCGACGT GGCGACCTCG
GATCAGCACG GGGTCAAACC GTGGTTCTCG GGCAAGGTCG GCTTCGCGCC GCCCGTGATC
GACCTCTCGG ATCGCGGCTT CGCGCTCGTC GGCGGACGCC TGGACTACAT CGGCGGCCAG
GTCGTCGCGG CCATCGTGTA CAAGCGGCGC GAGCACGTCA TTAACCTGTT CGTCTGGCCG
GGATCGTCGG TGGCGGAAGG GGCTCGGTCG GCCCGGACGT CGCGCGAGGG CTACAGCCTC
CTTCACTGGA CCCAAGCCGG GCTGACCTTC TGGGCCGTAT CGGATCTGAA CCCGACGGAG
CTGCAGGAAT TCGAGCAGGA CTTCGCGGCC CGCGCACCCA GCTAG
|
|---|
| Protein sequence | MRTAASCEPC ADQVPLLQGL LDGELDAANA LQAETHLRDC RACADYYGRL QAGRQRRRQE
GVRHRAPDAL RDRVRAAVAA QAAASPAASP VITAMPDAGP QRRRRFVERG AIALALAACL
AVIAVLPRGG DHGGPALPDE LVSGHVRSLL VSHLTDVATS DQHGVKPWFS GKVGFAPPVI
DLSDRGFALV GGRLDYIGGQ VVAAIVYKRR EHVINLFVWP GSSVAEGARS ARTSREGYSL
LHWTQAGLTF WAVSDLNPTE LQEFEQDFAA RAPS
|
|---|
| |