| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mnod_0201 |
|---|
| Symbol | |
|---|
| ID | 7304526 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium nodulans ORS 2060 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011894 |
|---|
| Strand | - |
|---|
| Start bp | 222484 |
|---|
| End bp | 224025 |
|---|
| Gene Length | 1542 bp |
|---|
| Protein Length | 513 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 643597982 |
|---|
| Product | alpha amylase catalytic region |
|---|
| Protein accession | YP_002495549 |
|---|
| Protein GI | 220920248 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0366] Glycosidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.213687 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGTTGCC GATCGATCCT GATCGCGTTC ATCGCCATGC TGCCGGTTGC GCTCGCTCTG
CCGCGTGCAG CGCACGGGCA AGCTGGATTC GACGATGACC GTGTTCTGTT GCAGAGCTTC
TACTGGGAAT CCTATCGGCA CGGCCACCCC GTCAAGTTCC CGGCCTACGG CAACAAGCGT
TGGTATCGTA TCGTTGCGGA ACTCGCTCCA GCCATCCGCG CGGGCCGCTT TGATCTCATC
TGGCTGCCTT CGCCCTCCTT TTCTGGCGCT CACGCGGCAT GCATGCCGCG CGAATGCCTC
CACAGCGCAG GCTACAACCC CAAAGAGTAT TTCGACCTCG ACAACAGCTA CGGTGATGCT
GCCGAGCACG CGTCCATGCT GACGAACCTG CTCGGCAACG GGGTCGAGCC GGTTGCCGAT
CTCGTCCTCA ACCACCGCGA TGGATCTCAG AGCTGGGGCG ACTTCAGGAA TCCGGATTGG
GGTCCGTGGG CGATAACGCG CGACGATGAG GCGTTCACCA ACCCCGCCTC ACCCCTGTTC
AACCTGCCCG TGCCTCAAAG AGGCGCTCCG GAAGAGAAGC CGGTCGAGTA TGCCCGACAC
GGCGGGACCA CCTATGCCTA TGGCTCGTTC CGGGACCTCG ACCACACCAA TGAGCAAGTC
CGCCGGGACA TCATCCGTTA CCTGCTTCAG CTGAAGAGTC TCGGCTACCG CGGGTGGCGC
TACGACATGG TCCACGGCTA CCACGCCAGG TGGATCGCCG TGTACAACCG CGCCTCCGCC
CCAACCTTCT CGGTGGGCGA ATACGATTGG GACAAGCCGG ACGAACAACG AGGGTGGGTG
TGGTTTACGG CTGCCGTTCC GGGTCGCCTG GAGACGTCCA GCAGCGTGTT CGACTTCATG
ACCCAGTTCT ACCTGAAGGA CCACAAGGGC GACTCCGTCG CGCAATACGG CACCGGGCGC
GGCCTCGTCG GCGACACCAC CGATGGACAG CCCTGGAAGA ACAAGGCAGT CACCTTTCTG
GAGAACCATG ACACGGGCTA CCGGACCAAC GAGGACGGCA CGCCTGAGAA CAGCCACACG
GCCGACAGCT TTGCGAACGG CTGGGAGGTG GAGCAGGGAT ATGCCCGTAT TCTCACCCAC
CCTGGCGTGC CGGCGGTTTA CTGGAAGCAC TACTTTGATT GGGGCCCTGA CCTGAGCGCC
AAGATCCGTG CGCTGATCAA TGCCCGGAAG GTGGCAGGCG TGCACGCCGG CAGTGCCGTC
CACCCGCAGG ACAACGCGCG TTCAGCCAAC GTCTATGCCG CCCGCGTAGA GGGGCGGAAC
GGGGATCTCT ACGTCAGGAT CGGAGGAAGC GACACGGACT GGCAGCCGTC CCGGTCGGGC
TATCGCGACT ACCGCGAATA TGCCCGGGGG GCCGGGTGGA CGGTGTGGGT GGGGCTCTCC
GGCAATCCTG CTTTCCAGGA GGCTCCGCTC AGGGCGCCCT TGCCGATCCC GATCTACCGG
GACCCGCAGA CGATCGACGT GCCCGATCGC CTGCTCAATT AG
|
|---|
| Protein sequence | MRCRSILIAF IAMLPVALAL PRAAHGQAGF DDDRVLLQSF YWESYRHGHP VKFPAYGNKR
WYRIVAELAP AIRAGRFDLI WLPSPSFSGA HAACMPRECL HSAGYNPKEY FDLDNSYGDA
AEHASMLTNL LGNGVEPVAD LVLNHRDGSQ SWGDFRNPDW GPWAITRDDE AFTNPASPLF
NLPVPQRGAP EEKPVEYARH GGTTYAYGSF RDLDHTNEQV RRDIIRYLLQ LKSLGYRGWR
YDMVHGYHAR WIAVYNRASA PTFSVGEYDW DKPDEQRGWV WFTAAVPGRL ETSSSVFDFM
TQFYLKDHKG DSVAQYGTGR GLVGDTTDGQ PWKNKAVTFL ENHDTGYRTN EDGTPENSHT
ADSFANGWEV EQGYARILTH PGVPAVYWKH YFDWGPDLSA KIRALINARK VAGVHAGSAV
HPQDNARSAN VYAARVEGRN GDLYVRIGGS DTDWQPSRSG YRDYREYARG AGWTVWVGLS
GNPAFQEAPL RAPLPIPIYR DPQTIDVPDR LLN
|
|---|
| |