| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mnod_8362 |
|---|
| Symbol | |
|---|
| ID | 7300637 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium nodulans ORS 2060 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011892 |
|---|
| Strand | - |
|---|
| Start bp | 101193 |
|---|
| End bp | 102554 |
|---|
| Gene Length | 1362 bp |
|---|
| Protein Length | 453 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 643597411 |
|---|
| Product | major facilitator superfamily MFS_1 |
|---|
| Protein accession | YP_002494988 |
|---|
| Protein GI | 220919685 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTATCCC TAAGGAGCAG CGCAAAACCC CCGAGCCAGC CACCCGGCTC GGCTGAGTTG
ATCGACCTTC ACGACCCGGA CAAGCCTAAT ATCACGAAGA AGGCTCGCAA CGTCATCACG
CTGGCGGCCA CTCTCGGCTA CCTCTTCGAC GCTTACGCAA TCAACATCTA CGGCATGACC
CTCGGGCTCA TCGCTGTAGA ATTCGGCGTC GATGTGAAGA CAATGGGAGC AATCGGATCG
ATCTTCATCG TCGGATACAT GCTGGGCAGT TGCGTGTTCG GCATGCTGGG CGATCGCTTC
GGTAGAAAAG TAACGCTTGG CTTTTCGATT TTCGCCTATG GCAGCGTCAC TGCGCTAACC
GGGCTTGCCG TCACCCCTGT CCAGTTTGCG ATCGGCCGCT TCCTCACCGG GCTCGGCGGC
GGGGGAGAAC TGACGGTCGG CGTCCCCTAT GTCGTGGAAT CATGGGATAG CAAGAAGCGT
GGCTTAGGTG CAGGCCTCAT GTTCGCGGGC TATGCCCTTG GGGTGGTGTA CGCAGCGATT
GTTTCTGCAC TCATTCTCGA GTGGCTTGGC TGGCGCGCAA TGTACTTCCT CGCGATCTTG
CCTGCGATCC TTATTCTGTT CGTTCGGATG CAGTTGGAGG AAAGCCCGAG CTACACAGCA
ACGATAGAGC GCTTGAAGAA GGCGAAGCTA AAGCGGGCCT CTTTCTTTAC ATCACTTAAA
ACTAGCCCGA GGCTGCGGCG CAACGTGATG TGGGGAGCCC TGATCTACAC CTCTCTCGCA
GGAATCTACT ATGCTGAGAC GGTGTTTGCA GTGCCGTTCA TGGTCTCGAC CCTGAAAATG
AGCACCACGG TCGCCGTTGC CACGCTCGGC CTGTTCAATC TCTCGATGTT TGGTTTTTCT
ATCTTTTGCG GCCACCTCTC TGATTACATC GGCCGCAAGC GAGCTGGCGC TATCACATTG
CTTGTTCTAG CCGGCTCTCT GTGGGTGATG TTCTCGACAA CCTCGATTCC GCTGTTCGTC
ATCTGTGGAG TCTTGGCGTT TGGTGGCATT GGAGGTTCTT GGGCCATCGG CATGGTGCAT
GTGGCGGAAC TCTTCCCAAC GGAGATCCGC GGGTCTGGCT ACGGCTGGTC AGTGGCGCTC
GGTCGGTTTC CGTCCATTTT TGCTCCGATT GCGATCGGCT GGCTCGCCAG CTTGACGCCG
GGCGGCATGG GCGACGCCAT GAAGTACTCT TGTGTCGTTC TGCTGTTCGC CTTGGCCGCG
TATCTGCTCG GGCCTGAGAC GCTCGACCAA ACCGAGGTTG ATCACGTCCT CAAGAACGAG
GACGACCAGG TGCTCGAACT CCATGAGGCG GGATCTCACT GA
|
|---|
| Protein sequence | MLSLRSSAKP PSQPPGSAEL IDLHDPDKPN ITKKARNVIT LAATLGYLFD AYAINIYGMT
LGLIAVEFGV DVKTMGAIGS IFIVGYMLGS CVFGMLGDRF GRKVTLGFSI FAYGSVTALT
GLAVTPVQFA IGRFLTGLGG GGELTVGVPY VVESWDSKKR GLGAGLMFAG YALGVVYAAI
VSALILEWLG WRAMYFLAIL PAILILFVRM QLEESPSYTA TIERLKKAKL KRASFFTSLK
TSPRLRRNVM WGALIYTSLA GIYYAETVFA VPFMVSTLKM STTVAVATLG LFNLSMFGFS
IFCGHLSDYI GRKRAGAITL LVLAGSLWVM FSTTSIPLFV ICGVLAFGGI GGSWAIGMVH
VAELFPTEIR GSGYGWSVAL GRFPSIFAPI AIGWLASLTP GGMGDAMKYS CVVLLFALAA
YLLGPETLDQ TEVDHVLKNE DDQVLELHEA GSH
|
|---|
| |